RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 C4orf50Q6ZRC1 276 aa14.87□□□□□ -0.03
VRK3-217ENST00000599538 CCDC121Q6ZUS5 278 aa14.87□□□□□ -0.03
VRK3-217ENST00000599538 SLC26A11Q86WA9 606 aa14.87□□□□□ -0.03
VRK3-217ENST00000599538 ZNF276Q8N554 614 aa14.87□□□□□ -0.03
VRK3-217ENST00000599538 URGCPQ8TCY9 931 aa14.87□□□□□ -0.03
VRK3-217ENST00000599538 ZNF296Q8WUU4 475 aaPredicted RBP14.87□□□□□ -0.03
VRK3-217ENST00000599538 GPR62Q9BZJ7 368 aa14.87□□□□□ -0.03
VRK3-217ENST00000599538 XAB2Q9HCS7 855 aaKnown RBP14.87□□□□□ -0.03
VRK3-217ENST00000599538 ABCF3Q9NUQ8 709 aa14.87□□□□□ -0.03
VRK3-217ENST00000599538 IL1RAPL1Q9NZN1 696 aa14.87□□□□□ -0.03
VRK3-217ENST00000599538 KLHL8Q9P2G9 620 aaPredicted RBP14.87□□□□□ -0.03
VRK3-217ENST00000599538 IKBKGQ9Y6K9 419 aa14.87□□□□□ -0.03
VRK3-217ENST00000599538 MYO16Q9Y6X6 1858 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 GOLGA6L7A0A1B0GV03 622 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 HMX2A2RU54 273 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 TRIM49D1C9J1S8 452 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 TMEM189-UBE2V1I3L0A0 370 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 ENPP3O14638 875 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 TADA2AO75478 443 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 SELPP16109 830 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 VARS2Q5ST30 1063 aaKnown RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 RWDD4Q6NW29 188 aaKnown RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 CASC4Q6P4E1 433 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 CES3Q6UWW8 571 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 ARHGAP36Q6ZRI8 547 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 CDHR3Q6ZTQ4 885 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 ATAD1Q8NBU5 361 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 GSDMBQ8TAX9 411 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 ZSCAN18Q8TBC5 510 aaPredicted RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 EPAS1Q99814 870 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 ALG13Q9NP73 1137 aaKnown RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 NDFIP2Q9NV92 336 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 TMEM161AQ9NX61 479 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 USP15Q9Y4E8 981 aaPredicted RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 PCDHA11Q9Y5I1 949 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 IQANK1A0A1B0GTG1 560 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 CCT8L1PA6NM43 557 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 NT5C1B-RDH14C9J2C7 533 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 TRDMT1O14717 391 aaKnown RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 STK10O94804 968 aaKnown RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 GARSP41250 739 aaKnown RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 CDK7P50613 346 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 GALNT2Q10471 571 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 ITIH4Q14624 930 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 PDK4Q16654 411 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 HHATQ5VTY9 493 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 LRRC8BQ6P9F7 803 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 FAM126BQ8IXS8 530 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 MICALL1Q8N3F8 863 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.86□□□□□ -0.03
VRK3-217ENST00000599538 STAMBPL1Q96FJ0 436 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 FAM193BQ96PV7 902 aaPredicted RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 PITPNM3Q9BZ71 974 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 SSU72Q9NP77 194 aaKnown RBP14.86□□□□□ -0.03
VRK3-217ENST00000599538 ABCC13Q9NSE7 274 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 SYBUQ9NX95 663 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 ARHGEF38Q9NXL2 777 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 IGSF9Q9P2J2 1179 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 PHF24Q9UPV7 400 aa14.86□□□□□ -0.03
VRK3-217ENST00000599538 FAM159BA6NKW6 160 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 PAGE1O75459 146 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 PAX3P23760 479 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 VEGFBP49765 207 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 MGAT5Q09328 741 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 MTFR1Q15390 333 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 RSPO2Q6UXX9 243 aaPredicted RBP14.85□□□□□ -0.03
VRK3-217ENST00000599538 SPATA21Q7Z572 469 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 REM2Q8IYK8 340 aaPredicted RBP14.85□□□□□ -0.03
VRK3-217ENST00000599538 ANKS4BQ8N8V4 417 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 OR52K1Q8NGK4 314 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 DPF3Q92784 378 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 HDAC11Q96DB2 347 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 ZNF419Q96HQ0 510 aaPredicted RBP14.85□□□□□ -0.03
VRK3-217ENST00000599538 EIF2B3Q9NR50 452 aaKnown RBP14.85□□□□□ -0.03
VRK3-217ENST00000599538 MOCS1Q9NZB8 636 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 SCN5AQ14524 2016 aa14.85□□□□□ -0.03
VRK3-217ENST00000599538 ZWINTO95229 277 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 MOCS2O96007 188 aaPredicted RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 MLNP12872 115 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 CDK16Q00536 496 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 SLC18A2Q05940 514 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 FAM171A1Q5VUB5 890 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 TMEM173Q86WV6 379 aaPredicted RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 SLAIN1Q8ND83 568 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 PTPRN2Q92932 1015 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 RMDN2Q96LZ7 410 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 CASD1Q96PB1 797 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 MLPHQ9BV36 600 aaPredicted RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 OSBPL2Q9H1P3 480 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 CRISPLD1Q9H336 500 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 SMOC2Q9H3U7 446 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 UBP1Q9NZI7 540 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 PRKAG3Q9UGI9 489 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 CAPN7Q9Y6W3 813 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 ARHGEF37A1IGU5 675 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 SDR42E2A6NKP2 422 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 HGSO14964 777 aaPredicted RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 LPXNO60711 386 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 RFPL1O75677 317 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 GBP2P32456 591 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms