RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 VANGL2Q9ULK5 521 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 FARP1Q9Y4F1 1045 aaPredicted RBP23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 MTCL1Q9Y4B5 1905 aaKnown RBP23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 DNAJB1P25685 340 aa23.64■■□□□ 1.38
SPTBN4-210ENST00000596900 ZNF33AQ06730 810 aa23.64■■□□□ 1.38
SPTBN4-210ENST00000596900 GALNT2Q10471 571 aa23.64■■□□□ 1.38
SPTBN4-210ENST00000596900 AUHQ13825 339 aaKnown RBP23.64■■□□□ 1.38
SPTBN4-210ENST00000596900 PDE12Q6L8Q7 609 aaKnown RBP23.64■■□□□ 1.38
SPTBN4-210ENST00000596900 CCDC33Q8N5R6 958 aa23.64■■□□□ 1.38
SPTBN4-210ENST00000596900 RTL3Q8N8U3 475 aaKnown RBP23.64■■□□□ 1.38
SPTBN4-210ENST00000596900 ZYG11BQ9C0D3 744 aa23.64■■□□□ 1.38
SPTBN4-210ENST00000596900 PCDHA11Q9Y5I1 949 aa23.64■■□□□ 1.38
SPTBN4-210ENST00000596900 WASH4PA8MWX3 477 aa23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 CSPG5O95196 566 aa23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 MYOGP15173 224 aa23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 SLC11A2P49281 568 aa23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 PPIDQ08752 370 aaKnown RBP23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 SHHQ15465 462 aa23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 ARHGEF18Q6ZSZ5 1173 aa23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 CPT1BQ92523 772 aa23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 PABPC3Q9H361 631 aaKnown RBP23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 OGFRQ9NZT2 677 aa23.64■■□□□ 1.37
SPTBN4-210ENST00000596900 OBSL1O75147 1896 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 F11P03951 625 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 GARSP41250 739 aaKnown RBP23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 CLCN4P51793 760 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 PPM1LQ5SGD2 360 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 RAP1GAP2Q684P5 730 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 TRMT10CQ7L0Y3 403 aaKnown RBP23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 CHSY1Q86X52 802 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 PRCCQ92733 491 aaPredicted RBP23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 P2RY11Q96G91 374 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 GCNAQ96QF7 691 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 ZNF334Q9HCZ1 680 aaPredicted RBP23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 MED4Q9NPJ6 270 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 RAB6BQ9NRW1 208 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 FAM53CQ9NYF3 392 aa23.63■■□□□ 1.37
SPTBN4-210ENST00000596900 IGLV3-10A0A075B6K4 115 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 A0A0A0MRY4 1105 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 GRXCR1A8MXD5 290 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 CHADO15335 359 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 OPHN1O60890 802 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 VAV1P15498 845 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 RHOQP17081 205 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 NRLP54845 237 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 C14orf80Q86SX3 495 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 IQCKQ8N0W5 287 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 KRT222Q8N1A0 295 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 GOLGA6L1Q8N7Z2 621 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 NAT8LQ8N9F0 302 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 CCDC110Q8TBZ0 833 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 MRPS31Q92665 395 aaKnown RBP23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 AZIN2Q96A70 460 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 SPATA13Q96N96 652 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 PHACTR1Q9C0D0 580 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 DOCK4Q8N1I0 1966 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 GABRR2P28476 465 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 CDC25CP30307 473 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 CHKAP35790 457 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 KCNQ1P51787 676 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 FAM193AP78312 1265 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 UAP1Q16222 522 aaPredicted RBP23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 PPP1R21Q6ZMI0 780 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 TMEM150AQ86TG1 271 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 ZNF683Q8IZ20 524 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 LRRN4Q8WUT4 740 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 ZIM3Q96PE6 472 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 IL21Q9HBE4 155 aa23.62■■□□□ 1.37
SPTBN4-210ENST00000596900 C2orf78A6NCI8 922 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 CCDC85CA6NKD9 419 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 F5H5T6 163 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 RNF103O00237 685 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 GRM6O15303 877 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 ACSL4O60488 711 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 ANKRD20A2Q5SQ80 823 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 ANKRD20A1Q5TYW2 823 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 ANKRD20A3Q5VUR7 823 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 DENND2CQ68D51 928 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 FAM109BQ6ICB4 259 aaPredicted RBP23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 LRIG3Q6UXM1 1119 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 CENPUQ71F23 418 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 RELL1Q8IUW5 271 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 LRRC49Q8IUZ0 686 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 PKNOX2Q96KN3 472 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 RPRD1AQ96P16 312 aaPredicted RBP23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 RBM15Q96T37 977 aaKnown RBP eCLIP23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 VAT1Q99536 393 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 PRMT1Q99873 361 aaKnown RBP23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 FRMD8Q9BZ67 464 aaPredicted RBP23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 TRPC7Q9HCX4 862 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 TMEM248Q9NWD8 314 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 MPP6Q9NZW5 540 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 DPP7Q9UHL4 492 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 PLAAQ9Y263 795 aa23.61■■□□□ 1.37
SPTBN4-210ENST00000596900 OPA1O60313 960 aa23.6■■□□□ 1.37
SPTBN4-210ENST00000596900 ARHGEF15O94989 841 aa23.6■■□□□ 1.37
SPTBN4-210ENST00000596900 MBL2P11226 248 aaPredicted RBP23.6■■□□□ 1.37
SPTBN4-210ENST00000596900 ERVK-21P61565 698 aa23.6■■□□□ 1.37
SPTBN4-210ENST00000596900 FBXL22Q6P050 247 aa23.6■■□□□ 1.37
SPTBN4-210ENST00000596900 ATPAF2Q8N5M1 289 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms