RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 MTA1Q13330 715 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 SLC45A4Q5BKX6 768 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 RAP1GAP2Q684P5 730 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 NADSYN1Q6IA69 706 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 ZDHHC24Q6UX98 284 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 PDZD4Q76G19 769 aaPredicted RBP15.64■□□□□ 0.09
VRK3-207ENST00000594092 CDKL3Q8IVW4 592 aaPredicted RBP15.64■□□□□ 0.09
VRK3-207ENST00000594092 TP53INP2Q8IXH6 220 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 KRT222Q8N1A0 295 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 BBOF1Q8ND07 529 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 MRPS31Q92665 395 aaKnown RBP15.64■□□□□ 0.09
VRK3-207ENST00000594092 ZFRQ96KR1 1074 aaKnown RBP15.64■□□□□ 0.09
VRK3-207ENST00000594092 QKIQ96PU8 341 aaKnown RBP eCLIP15.64■□□□□ 0.09
VRK3-207ENST00000594092 VANGL2Q9ULK5 521 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 HCFC2Q9Y5Z7 792 aa15.64■□□□□ 0.09
VRK3-207ENST00000594092 A0A1W2PRU2 124 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 CFAP69A5D8W1 941 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 FGF10O15520 208 aaPredicted RBP15.63■□□□□ 0.09
VRK3-207ENST00000594092 HNRNPA1P09651 372 aaKnown RBP eCLIP15.63■□□□□ 0.09
VRK3-207ENST00000594092 MBL2P11226 248 aaPredicted RBP15.63■□□□□ 0.09
VRK3-207ENST00000594092 MYL4P12829 197 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 ITIH2P19823 946 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 RBL1P28749 1068 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 SERPINB6P35237 376 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 HSPA9P38646 679 aaKnown RBP15.63■□□□□ 0.09
VRK3-207ENST00000594092 ADCY8P40145 1251 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 HARS2P49590 506 aaKnown RBP15.63■□□□□ 0.09
VRK3-207ENST00000594092 EPHA5P54756 1037 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 ACBD5Q5T8D3 534 aaPredicted RBP15.63■□□□□ 0.09
VRK3-207ENST00000594092 TDHQ8IZJ6 230 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 ARL14EPQ8N8R7 260 aaPredicted RBP15.63■□□□□ 0.09
VRK3-207ENST00000594092 FBXO25Q8TCJ0 367 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 ART4Q93070 314 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 ATXN3LQ9H3M9 355 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 CATSPERBQ9H7T0 1116 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 RAD54BQ9Y620 910 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 CDH23Q9H251 3354 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 DENND4CQ5VZ89 1909 aa15.63■□□□□ 0.09
VRK3-207ENST00000594092 DOCK6Q96HP0 2047 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 IGLV3-10A0A075B6K4 115 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 GOLGA6L7A0A1B0GV03 622 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 HACD1B0YJ81 288 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 KCNN4O15554 427 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 ACSL4O60488 711 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 KLKB1P03952 638 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 GJA1P17302 382 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 PTPN2P17706 415 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 HDCP19113 662 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 CCR2P41597 374 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 NRLP54845 237 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 CAV1Q03135 178 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 PDK1Q15118 436 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 FBXL22Q6P050 247 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 LRRC31Q6UY01 552 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 CHSY1Q86X52 802 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 MAB21L3Q8N8X9 362 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 TSEN2Q8NCE0 465 aaKnown RBP15.62■□□□□ 0.09
VRK3-207ENST00000594092 TFB1MQ8WVM0 346 aaKnown RBP15.62■□□□□ 0.09
VRK3-207ENST00000594092 WBP2Q969T9 261 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 RTP4Q96DX8 246 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 GCNAQ96QF7 691 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 LGMNQ99538 433 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 KLC2Q9H0B6 622 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 TLE6Q9H808 572 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 SMPD4Q9NXE4 827 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 ZDHHC7Q9NXF8 308 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 MPP6Q9NZW5 540 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 DNMT3BQ9UBC3 853 aaKnown RBP15.62■□□□□ 0.09
VRK3-207ENST00000594092 PPARGC1AQ9UBK2 798 aaKnown RBP15.62■□□□□ 0.09
VRK3-207ENST00000594092 DPP7Q9UHL4 492 aa15.62■□□□□ 0.09
VRK3-207ENST00000594092 GOLGA6BA6NDN3 693 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 SPDYE4A6NLX3 237 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 WASH4PA8MWX3 477 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 TP73O15350 636 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 IRF1P10914 325 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 TACR2P21452 398 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 CORO1AP31146 461 aaKnown RBP15.61■□□□□ 0.09
VRK3-207ENST00000594092 SLC11A2P49281 568 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 IRAK1P51617 712 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 GPS1Q13098 491 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 ZNF697Q5TEC3 545 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 NLRP14Q86W24 1093 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 DENND1CQ8IV53 801 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 RTL3Q8N8U3 475 aaKnown RBP15.61■□□□□ 0.09
VRK3-207ENST00000594092 IGSF8Q969P0 613 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 AZIN2Q96A70 460 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 PRDM12Q9H4Q4 367 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 CLUHO75153 1309 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 DRGXA6NNA5 263 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 RFXAPO00287 272 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 PPP1R12AO14974 1030 aaPredicted RBP15.61■□□□□ 0.09
VRK3-207ENST00000594092 RRP9O43818 475 aaKnown RBP15.61■□□□□ 0.09
VRK3-207ENST00000594092 XYLBO75191 536 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 RHOP08100 348 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 VAV1P15498 845 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 RPL22P35268 128 aaKnown RBP15.61■□□□□ 0.09
VRK3-207ENST00000594092 NRIP1P48552 1158 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 SMAD3P84022 425 aaKnown RBP15.61■□□□□ 0.09
VRK3-207ENST00000594092 GALNT2Q10471 571 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 PRKD1Q15139 912 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms