RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 TRIM72Q6ZMU5 477 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 PRR23CQ6ZRP0 262 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 IRF2BP2Q7Z5L9 587 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 MSANTD4Q8NCY6 345 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 BAP1Q92560 729 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 ARHGEF38Q9NXL2 777 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 STAP1Q9ULZ2 295 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 HS3ST4Q9Y661 456 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 IGHV1OR15-9A0A0B4J2B8 117 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 ZNF217O75362 1048 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 PAGE1O75459 146 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 ATP5BP06576 529 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 EPHX1P07099 455 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 POLR2EP19388 210 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 MPLP40238 635 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 SULT1E1P49888 294 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 COPAP53621 1224 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 ATXN1P54253 815 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 CAMK2GQ13555 558 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 CDH18Q13634 790 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 SF3A2Q15428 464 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 RSPO4Q2I0M5 234 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 CLEC16AQ2KHT3 1053 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 FNDC3BQ53EP0 1204 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 PHLDB2Q86SQ0 1253 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 C14orf80Q86SX3 495 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 LUZP1Q86V48 1076 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 CIR1Q86X95 450 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 TMEFF1Q8IYR6 380 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 IGSF8Q969P0 613 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 MYO19Q96H55 970 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 SMOC1Q9H4F8 434 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 WDCPQ9H6R7 721 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 PRDM16Q9HAZ2 1276 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 DLL3Q9NYJ7 618 aa19.1■□□□□ 0.65
SHKBP1-202ENST00000593764 MUC22E2RYF6 1773 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 NUP205Q92621 2012 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 PRR5-ARHGAP8B1AHC4 643 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 H0Y626 953 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 MAP3K13O43283 966 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 GDF9O60383 454 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 SYNCRIPO60506 623 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 F9P00740 461 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 C7P10643 843 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 PTMSP20962 102 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 GGCXP38435 758 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 CSKP41240 450 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 PTGER3P43115 390 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 IRAK1P51617 712 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 ARHGAP8P85298 464 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 CREB5Q02930 508 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 CENPCQ03188 943 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 DEUP1Q05D60 604 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 MTA1Q13330 715 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 NR1I3Q14994 352 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 C5orf22Q49AR2 442 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 FILIP1LQ4L180 1135 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 SPDYCQ5MJ68 293 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 BRMS1LQ5PSV4 323 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 ARTNQ5T4W7 220 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 LPCAT2Q7L5N7 544 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 METTL3Q86U44 580 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 TMPRSS6Q8IU80 811 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 CCAR2Q8N163 923 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 ZNF366Q8N895 744 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 MRGPRX3Q96LB0 322 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 CFAP57Q96MR6 1250 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 AGPAT1Q99943 283 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 C11orf70Q9BRQ4 267 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 SYT11Q9BT88 431 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 TKTL2Q9H0I9 626 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 METTL5Q9NRN9 209 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 KIAA1522Q9P206 1035 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 VANGL2Q9ULK5 521 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 MYO6Q9UM54 1294 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 CYP8B1Q9UNU6 501 aa19.09■□□□□ 0.65
SHKBP1-202ENST00000593764 A0A1W2PQC6 194 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 ENDOD1O94919 500 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 CAVIN2O95810 425 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 DHPSP49366 369 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 GSCP56915 257 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 PITRM1Q5JRX3 1037 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 RABGAP1LQ5R372 815 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 TTC39BQ5VTQ0 682 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 CXorf57Q6NSI4 855 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 KIAA1324Q6UXG2 1013 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 PHF13Q86YI8 300 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 CCDC117Q8IWD4 279 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 ZNF683Q8IZ20 524 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 APCDD1Q8J025 514 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 EMC1Q8N766 993 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 RPRD1AQ96P16 312 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 SIK2Q9H0K1 926 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 PRSS16Q9NQE7 514 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 ITM2CQ9NQX7 267 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 TMPRSS4Q9NRS4 437 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 VPS45Q9NRW7 570 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 RXFP3Q9NSD7 469 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 USP36Q9P275 1121 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms