RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 MOCS3O95396 460 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 ZNF883P0CG24 379 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 GNA15P30679 374 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 CSKP41240 450 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 CSNK1EP49674 416 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 SFSWAPQ12872 951 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 HLA-BQ31612 363 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 MS4A13Q5J8X5 152 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 RAB44Q7Z6P3 723 aaPredicted RBP18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 TAC4Q86UU9 113 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 CREBRFQ8IUR6 639 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 CFAP52Q8N1V2 620 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 C1orf216Q8TAB5 229 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 ZNF606Q8WXB4 792 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 SLC39A13Q96H72 371 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 LMLNQ96KR4 655 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 FAM81BQ96LP2 452 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 MED15Q96RN5 788 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 SLC4A5Q9BY07 1137 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 NUCKS1Q9H1E3 243 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 POPDC2Q9HBU9 364 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 SGK2Q9HBY8 427 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 TM7SF3Q9NS93 570 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 TJP2Q9UDY2 1190 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 SCML1Q9UN30 329 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 CEP83Q9Y592 693 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 DMXL2Q8TDJ6 3036 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 DSPP15924 2871 aaKnown RBP18.58■□□□□ 0.57
PRKCSH-211ENST00000590098 E5RJQ4 531 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 FSBPO95073 299 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 FTH1P19P0C7X4 201 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 YWHAZP63104 245 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 BNC1Q01954 994 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 DCAF6Q58WW2 860 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 SYPL2Q5VXT5 272 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 LGI2Q8N0V4 545 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 ZCCHC14Q8WYQ9 949 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 BIRC7Q96CA5 298 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 MYEOVQ96EZ4 313 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 RSPH9Q9H1X1 276 aaPredicted RBP18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 THAP9Q9H5L6 903 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 OSGEPQ9NPF4 335 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 KIAA1522Q9P206 1035 aaPredicted RBP18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 PCOLCE2Q9UKZ9 415 aa18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 APOBEC2Q9Y235 224 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 ANKRD11Q6UB99 2663 aaPredicted RBP18.58■□□□□ 0.56
PRKCSH-211ENST00000590098 FAM221BA6H8Z2 402 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 PAPSS1O43252 624 aaPredicted RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 SIN3BO75182 1162 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 LUC7L3O95232 432 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 SRPRAP08240 638 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 USP8P40818 1118 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 SUZ12Q15022 739 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 HNRNPA1L2Q32P51 320 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 ZC3H12AQ5D1E8 599 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 FSCBQ5H9T9 825 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 PITRM1Q5JRX3 1037 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 RAP1GAP2Q684P5 730 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 MMS22LQ6ZRQ5 1243 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 USP30Q70CQ3 517 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 TMEM110Q86TL2 294 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 CHSY1Q86X52 802 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 DHX40Q8IX18 779 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 KDM1BQ8NB78 822 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 MYO19Q96H55 970 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 BTN2A3PQ96KV6 586 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 CRACR2AQ9BSW2 395 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 PABPC3Q9H361 631 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 MTG2Q9H4K7 406 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 TM9SF3Q9HD45 589 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 FBXL12Q9NXK8 326 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 SLC12A6Q9UHW9 1150 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 INTS6Q9UL03 887 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 ERVW-1Q9UQF0 538 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 FNDC3AQ9Y2H6 1198 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 SLCO1B1Q9Y6L6 691 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 SPEGQ15772 3267 aa18.57■□□□□ 0.56
PRKCSH-211ENST00000590098 PKD1L2Q7Z442 2459 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 CBFA2T3O75081 653 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 TRUB2O95900 331 aaKnown RBP18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 TACR2P21452 398 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 CD27P26842 260 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 ECT2LQ008S8 904 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 ARHGAP44Q17R89 818 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 KIF19Q2TAC6 998 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 RNF219Q5W0B1 726 aaPredicted RBP18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 TRIM65Q6PJ69 517 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 GBP6Q6ZN66 633 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 ADAT2Q7Z6V5 191 aaKnown RBP18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 GLRX5Q86SX6 157 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 PNPLA1Q8N8W4 532 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 ATP6V0D2Q8N8Y2 350 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 ADAMTS14Q8WXS8 1223 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 MRGPRX3Q96LB0 322 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 CYTH4Q9UIA0 394 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 XPO7Q9UIA9 1087 aaKnown RBP18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 RWDD2AQ9UIY3 292 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 ANKRD6Q9Y2G4 727 aa18.56■□□□□ 0.56
PRKCSH-211ENST00000590098 PCDHGB2Q9Y5G2 931 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms