RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 IGSF9Q9P2J2 1179 aa10.67□□□□□ -0.7
CLPTM1-207ENST00000587537 PRKAG3Q9UGI9 489 aa10.67□□□□□ -0.7
CLPTM1-207ENST00000587537 KIF26AQ9ULI4 1882 aaPredicted RBP10.67□□□□□ -0.7
CLPTM1-207ENST00000587537 GFRA2O00451 464 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 CHADO15335 359 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 MTSS1O43312 755 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 PRAMEF12O95522 483 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 FGGP02679 453 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 KLKB1P03952 638 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 IRF1P10914 325 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 PSMC3P17980 439 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 IL4RP24394 825 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 IFNAR2P48551 515 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 NDST2P52849 883 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 KLF1Q13351 362 aaPredicted RBP10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 XRCC4Q13426 336 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 PAFAH1B3Q15102 231 aaKnown RBP10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 LONRF2Q1L5Z9 754 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 PARP15Q460N3 678 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 ATP13A4Q4VNC1 1196 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 RAB6CQ53S08 254 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 FAM133BQ5BKY9 247 aaKnown RBP10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 C6orf118Q5T5N4 469 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 TMCO4Q5TGY1 634 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 DCAF12L1Q5VU92 463 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 RNF43Q68DV7 783 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 RWDD4Q6NW29 188 aaKnown RBP10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 FBXL22Q6P050 247 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 DRICH1Q6PGQ1 229 aaPredicted RBP10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 RFX6Q8HWS3 928 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 CREG2Q8IUH2 290 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 ZNF683Q8IZ20 524 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 RTL3Q8N8U3 475 aaKnown RBP10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 P3H4Q92791 437 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 TMA16Q96EY4 203 aaKnown RBP10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 ZSWIM3Q96MP5 696 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 RAB6CQ9H0N0 254 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 ARHGEF4Q9NR80 690 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 HAUS2Q9NVX0 235 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 VANGL2Q9ULK5 521 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 MRFAP1Q9Y605 127 aa10.66□□□□□ -0.7
CLPTM1-207ENST00000587537 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 CFAP69A5D8W1 941 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 HEPACAM2A8MVW5 462 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 HACD1B0YJ81 288 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 ANHXE9PGG2 379 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 PI4K2BG5E9Z4 385 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 H3BQ06 376 aaPredicted RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 I6L893 689 aaPredicted RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 PPP1R12AO14974 1030 aaPredicted RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 DCLK1O15075 740 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 CST8O60676 142 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 SRGAP2O75044 1071 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 GOT1P17174 413 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 CXCR5P32302 372 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 DNA2P51530 1060 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 ZNF177Q13360 481 aaPredicted RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 PDK1Q15118 436 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 CCDC85BQ15834 202 aaPredicted RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 CCNG2Q16589 344 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 CA9Q16790 459 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 RAP1GAP2Q684P5 730 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 NADSYN1Q6IA69 706 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 C1orf228Q6PIY5 440 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 METTL3Q86U44 580 aaKnown RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 CPNE8Q86YQ8 564 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 LGI2Q8N0V4 545 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 UMODL1-AS1Q8N2C9 162 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 CPA6Q8N4T0 437 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 C12orf50Q8NA57 414 aaPredicted RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 MAFAQ8NHW3 353 aaPredicted RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 PCDH19Q8TAB3 1148 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 GRK7Q8WTQ7 553 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 COG1Q8WTW3 980 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 IRF7Q92985 503 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 FATE1Q969F0 183 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 MSANTD3Q96H12 275 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 MYADMQ96S97 322 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 MAGEH1Q9H213 219 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 L2HGDHQ9H9P8 463 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 TRPV5Q9NQA5 729 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 SPHK2Q9NRA0 654 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 GPATCH2LQ9NWQ4 482 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 DUS2Q9NX74 493 aaKnown RBP10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 CCL26Q9Y258 94 aa10.65□□□□□ -0.7
CLPTM1-207ENST00000587537 ILVBLA1L0T0 632 aa10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 GRXCR2A6NFK2 248 aa10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 ZSCAN5CA6NGD5 496 aaPredicted RBP10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 ARHGAP42A6NI28 874 aa10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 KRIT1O00522 736 aa10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 MCF2LO15068 1137 aa10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 FANCGO15287 622 aa10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 HOXC11O43248 304 aaPredicted RBP10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 PENKP01210 267 aaPredicted RBP10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 ERCC2P18074 760 aa10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 FCARP24071 287 aa10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 CHRNA3P32297 505 aa10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 EIF2DP41214 584 aaKnown RBP10.64□□□□□ -0.71
CLPTM1-207ENST00000587537 FNTAP49354 379 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms