RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TRNP1Q6NT89 227 aa25.76■■□□□ 1.71
TSEN54-209ENST00000583454 CYP2U1Q7Z449 544 aa25.76■■□□□ 1.71
TSEN54-209ENST00000583454 ZNF513Q8N8E2 541 aaPredicted RBP25.76■■□□□ 1.71
TSEN54-209ENST00000583454 HMGB4Q8WW32 186 aa25.76■■□□□ 1.71
TSEN54-209ENST00000583454 PGAP3Q96FM1 320 aaPredicted RBP25.76■■□□□ 1.71
TSEN54-209ENST00000583454 VCPIP1Q96JH7 1222 aa25.76■■□□□ 1.71
TSEN54-209ENST00000583454 ADAM33Q9BZ11 813 aa25.76■■□□□ 1.71
TSEN54-209ENST00000583454 TAS2R14Q9NYV8 317 aa25.76■■□□□ 1.71
TSEN54-209ENST00000583454 CALCOCO1Q9P1Z2 691 aa25.76■■□□□ 1.71
TSEN54-209ENST00000583454 FBXO10Q9UK96 956 aa25.76■■□□□ 1.71
TSEN54-209ENST00000583454 STAP1Q9ULZ2 295 aa25.76■■□□□ 1.71
TSEN54-209ENST00000583454 ZZEF1O43149 2961 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 ADAMTS9Q9P2N4 1935 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 TCRBV21S2A2A0A5A6 115 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 KCNU1A8MYU2 1149 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 SERPING1P05155 500 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 SLC2A3P11169 496 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 PHLDB2Q86SQ0 1253 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 DRC7Q8IY82 874 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 MCOLN2Q8IZK6 566 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 C3orf20Q8ND61 904 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 XPO6Q96QU8 1125 aaKnown RBP25.75■■□□□ 1.71
TSEN54-209ENST00000583454 TRIM5Q9C035 493 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 METTL5Q9NRN9 209 aaKnown RBP25.75■■□□□ 1.71
TSEN54-209ENST00000583454 TMEM51Q9NW97 253 aa25.75■■□□□ 1.71
TSEN54-209ENST00000583454 A0A1W2PQF6 199 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 TCRBV5S1A1TA0A578 114 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 C4orf47A7E2U8 309 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 M0QYT0 321 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 CDX4O14627 284 aaPredicted RBP25.74■■□□□ 1.71
TSEN54-209ENST00000583454 APOEP02649 317 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 TFE3P19532 575 aaPredicted RBP25.74■■□□□ 1.71
TSEN54-209ENST00000583454 CCR1P32246 355 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 PTGER3P43115 390 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 DHPSP49366 369 aaPredicted RBP25.74■■□□□ 1.71
TSEN54-209ENST00000583454 ARID5BQ14865 1188 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 MPPE1Q53F39 396 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 EGFLAMQ63HQ2 1017 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 NADSYN1Q6IA69 706 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 BNIPLQ7Z465 357 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 BTN2A3PQ96KV6 586 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 ACOX2Q99424 681 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 DNAJC17Q9NVM6 304 aaKnown RBP25.74■■□□□ 1.71
TSEN54-209ENST00000583454 PLK2Q9NYY3 685 aa25.74■■□□□ 1.71
TSEN54-209ENST00000583454 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 GOLGA6L7A0A1B0GV03 622 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 SIGLEC16A6NMB1 481 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 PRRT4C9JH25 899 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 KHNYNO15037 678 aaKnown RBP25.73■■□□□ 1.71
TSEN54-209ENST00000583454 CYBBP04839 570 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 CISD3P0C7P0 127 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 GABRG2P18507 467 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 SLC6A4P31645 630 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 CXCR3P49682 368 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 PREPLQ4J6C6 727 aaPredicted RBP25.73■■□□□ 1.71
TSEN54-209ENST00000583454 PIK3R6Q5UE93 754 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 GRAMD4Q6IC98 578 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 TMEFF1Q8IYR6 380 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 OR8K1Q8NGG5 319 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 BHMTQ93088 406 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 TMA16Q96EY4 203 aaKnown RBP25.73■■□□□ 1.71
TSEN54-209ENST00000583454 TBCBQ99426 244 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 DNAJC7Q99615 494 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 DDX50Q9BQ39 737 aaKnown RBP25.73■■□□□ 1.71
TSEN54-209ENST00000583454 ANP32EQ9BTT0 268 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 PIGVQ9NUD9 493 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 TMEM74BQ9NUR3 256 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 BCCIPQ9P287 314 aaKnown RBP eCLIP25.73■■□□□ 1.71
TSEN54-209ENST00000583454 PCDH15Q96QU1 1955 aa25.73■■□□□ 1.71
TSEN54-209ENST00000583454 SYNJ2BP-COX16A0A087WUM0 186 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 C2CD4BA6NLJ0 364 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 TSPAN3O60637 253 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 ENDOD1O94919 500 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 F9P00740 461 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 KRT3P12035 628 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 SULT1E1P49888 294 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 IRX4P78413 519 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 SHC2P98077 582 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 TBX2Q13207 712 aaPredicted RBP25.72■■□□□ 1.71
TSEN54-209ENST00000583454 NME3Q13232 169 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 MPP7Q5T2T1 576 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 LPCAT2Q7L5N7 544 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 TRMT11Q7Z4G4 463 aaKnown RBP25.72■■□□□ 1.71
TSEN54-209ENST00000583454 EMC1Q8N766 993 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 ATP6V0D2Q8N8Y2 350 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 JOSD2Q8TAC2 188 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 DDI1Q8WTU0 396 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 PIGKQ92643 395 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 SPACA7Q96KW9 195 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 COX16Q9P0S2 106 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 SLC12A6Q9UHW9 1150 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 EVLQ9UI08 416 aaPredicted RBP25.72■■□□□ 1.71
TSEN54-209ENST00000583454 XPO7Q9UIA9 1087 aaKnown RBP25.72■■□□□ 1.71
TSEN54-209ENST00000583454 WDFY3Q8IZQ1 3526 aa25.72■■□□□ 1.71
TSEN54-209ENST00000583454 TMCO5BA8MYB1 307 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 RTN2O75298 545 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 KRT37O76014 449 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 GJB6O95452 261 aa25.71■■□□□ 1.71
TSEN54-209ENST00000583454 MOCS2O96007 188 aaPredicted RBP25.71■■□□□ 1.71
TSEN54-209ENST00000583454 FTLP02792 175 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms