RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 WASH3PC4AMC7 463 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 F8VZ95 297 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 NPC1O15118 1278 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 TIMM44O43615 452 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 GRAP2O75791 330 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 TRUB2O95900 331 aaKnown RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 ERBB2P04626 1255 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 GABRG2P18507 467 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 BCKDHBP21953 392 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 SLC6A4P31645 630 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 P2RY2P41231 377 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 KLK7P49862 253 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 SGSHP51688 502 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 POLR2FP61218 127 aaKnown RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 ARHGAP8P85298 464 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 SLC6A3Q01959 620 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 UBXN1Q04323 297 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 STARD3Q14849 445 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 EIF4HQ15056 248 aaKnown RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 CCDC6Q16204 474 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 CSRP2Q16527 193 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 FAM133BQ5BKY9 247 aaKnown RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 ZC3H12AQ5D1E8 599 aaKnown RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 MPP7Q5T2T1 576 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 PRR23CQ6ZRP0 262 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 TMTC1Q8IUR5 882 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 CCDC117Q8IWD4 279 aaPredicted RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 DEFB106AQ8N104 65 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 CCAR2Q8N163 923 aaKnown RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 ATP6V0D2Q8N8Y2 350 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 HJURPQ8NCD3 748 aaPredicted RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 OLIG1Q8TAK6 271 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 WFIKKN2Q8TEU8 576 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 RNF34Q969K3 372 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 RMDN1Q96DB5 314 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 SLC39A13Q96H72 371 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 SLC2A13Q96QE2 648 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 SPAG5Q96R06 1193 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 BAG1Q99933 345 aaPredicted RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 IRX2Q9BZI1 471 aaPredicted RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 FAM204AQ9H8W3 233 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 NLRC4Q9NPP4 1024 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 ABCB8Q9NUT2 735 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 COX16Q9P0S2 106 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 THAP10Q9P2Z0 257 aaPredicted RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 SLC12A6Q9UHW9 1150 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 GGA2Q9UJY4 613 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 CAPN11Q9UMQ6 739 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 DAAM1Q9Y4D1 1078 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 PCDHGA5Q9Y5G8 931 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 RAD54BQ9Y620 910 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.41□□□□□ -0.9
NDE1-207ENST00000573203 STON1Q9Y6Q2 735 aa9.41□□□□□ -0.9
NDE1-207ENST00000573203 FAM170AA1A519 330 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 ZSCAN12O43309 604 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 SYNCRIPO60506 623 aaKnown RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 FOXD2O60548 495 aaPredicted RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 MFAP3LO75121 409 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 DAB1O75553 588 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 GFPT2O94808 682 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 IGLV3-25P01717 112 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 MMEP08473 750 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 SLC2A3P11169 496 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 PABPC1P11940 636 aaKnown RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 NDUFV2P19404 249 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 ABCB4P21439 1286 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 SDHBP21912 280 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 HLA-FP30511 346 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 HNRNPH3P31942 346 aaKnown RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 CDH5P33151 784 aaPredicted RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 MPLP40238 635 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 IL12RB1P42701 662 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 DHPSP49366 369 aaPredicted RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 RPS24P62847 133 aaKnown RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 PITX1P78337 314 aaPredicted RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 CREB5Q02930 508 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 ZNF234Q14588 700 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 SYCP1Q15431 976 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 RSPO4Q2I0M5 234 aaPredicted RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 AASDHQ4L235 1098 aaPredicted RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 MS4A13Q5J8X5 152 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 E4F1Q66K89 784 aaPredicted RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 PMS2CLQ68D20 193 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 TMEM215Q68D42 235 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 NADSYN1Q6IA69 706 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 KIAA1211LQ6NV74 962 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 OLFML1Q6UWY5 402 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 SERPINA13PQ6UXR4 307 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 CHST9Q7L1S5 443 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 LPCAT2Q7L5N7 544 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 SLC26A9Q7LBE3 791 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 NOP9Q86U38 636 aaKnown RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 CHSY1Q86X52 802 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 ERICH1Q86X53 443 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 ZDHHC17Q8IUH5 632 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 MFN1Q8IWA4 741 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 LGI2Q8N0V4 545 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 AHI1Q8N157 1196 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 CARNMT1Q8N4J0 409 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 ZNF557Q8N988 423 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms