RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 TAC4Q86UU9 113 aa17.85■□□□□ 0.45
RPAIN-208ENST00000571043 EXOC3L1Q86VI1 746 aa17.85■□□□□ 0.45
RPAIN-208ENST00000571043 SCAMP5Q8TAC9 235 aa17.85■□□□□ 0.45
RPAIN-208ENST00000571043 HTR3CQ8WXA8 447 aa17.85■□□□□ 0.45
RPAIN-208ENST00000571043 FERMT1Q9BQL6 677 aa17.85■□□□□ 0.45
RPAIN-208ENST00000571043 VPS37BQ9H9H4 285 aa17.85■□□□□ 0.45
RPAIN-208ENST00000571043 MTCL1Q9Y4B5 1905 aaKnown RBP17.85■□□□□ 0.45
RPAIN-208ENST00000571043 EXOC1LA0A1B0GW35 172 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 PPP1R12AO14974 1030 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-208ENST00000571043 ADAM12O43184 909 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 OR4Q2P0C623 313 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 RPL17P18621 184 aaKnown RBP17.84■□□□□ 0.45
RPAIN-208ENST00000571043 GPX6P59796 221 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 TPI1P60174 286 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 NR1H3Q13133 447 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 CCDC38Q502W7 563 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 BTBD8Q5XKL5 378 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 TAB3Q8N5C8 712 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-208ENST00000571043 CCDC110Q8TBZ0 833 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 ARHGEF2Q92974 986 aaKnown RBP17.84■□□□□ 0.45
RPAIN-208ENST00000571043 BRD8Q9H0E9 1235 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 LMAN2LQ9H0V9 348 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 OSBPL2Q9H1P3 480 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 EPN3Q9H201 632 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 ZNF576Q9H609 170 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 ETNK1Q9HBU6 452 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 ANLNQ9NQW6 1124 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 ENTPD7Q9NQZ7 604 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 SLC24A2Q9UI40 661 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 MFHAS1Q9Y4C4 1052 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 PCDHB5Q9Y5E4 795 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 ACTL7BQ9Y614 415 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 CLUHO75153 1309 aa17.84■□□□□ 0.45
RPAIN-208ENST00000571043 A0A0A0MRY4 1105 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 C2orf71A6NGG8 1288 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 EPOPA6NHQ4 379 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 I6L893 689 aaPredicted RBP17.83■□□□□ 0.45
RPAIN-208ENST00000571043 NCAM2O15394 837 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 TEX28O15482 410 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 STK10O94804 968 aaKnown RBP17.83■□□□□ 0.45
RPAIN-208ENST00000571043 ABLIM3O94929 683 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 CNPP09543 421 aaKnown RBP17.83■□□□□ 0.45
RPAIN-208ENST00000571043 ERCC2P18074 760 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 TPSB2P20231 275 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 FDFT1P37268 417 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 RAB33AQ14088 237 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 TPSAB1Q15661 275 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 BBS9Q3SYG4 887 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 BRMS1LQ5PSV4 323 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 TADA2BQ86TJ2 420 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 ANKMY2Q8IV38 441 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 FBXO36Q8NEA4 188 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 ZNF461Q8TAF7 563 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 SPATA13Q96N96 652 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 EPAS1Q99814 870 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 TKTL2Q9H0I9 626 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 ARHGEF38Q9NXL2 777 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 ABI2Q9NYB9 513 aaPredicted RBP17.83■□□□□ 0.45
RPAIN-208ENST00000571043 SCML2Q9UQR0 700 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 ATG2AQ2TAZ0 1938 aa17.83■□□□□ 0.45
RPAIN-208ENST00000571043 WDR27A2RRH5 827 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 FAM72CH0Y354 149 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 IRAK2O43187 625 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 SPAG6O75602 509 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 CPB1P15086 417 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 VAV1P15498 845 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 HTR7P34969 479 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 IRS1P35568 1242 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 ARPP19P56211 112 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 SEMA5AQ13591 1074 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 HP1BP3Q5SSJ5 553 aaPredicted RBP17.82■□□□□ 0.44
RPAIN-208ENST00000571043 FAM72AQ5TYM5 149 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 FAM72DQ6L9T8 149 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 ARHGEF18Q6ZSZ5 1173 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 SCD5Q86SK9 330 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 FAM72BQ86X60 149 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 SCN4BQ8IWT1 228 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 PALM2Q8IXS6 379 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 NUP93Q8N1F7 819 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 ARHGAP18Q8N392 663 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 BCAS4Q8TDM0 211 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 MICAL1Q8TDZ2 1067 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 LRRC39Q96DD0 335 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 KLHL5Q96PQ7 755 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 SELENOSQ9BQE4 189 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 WDR83Q9BRX9 315 aaKnown RBP17.82■□□□□ 0.44
RPAIN-208ENST00000571043 SMOC2Q9H3U7 446 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 FBXO44Q9H4M3 255 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 TMEM265A0A087WTH1 108 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.82■□□□□ 0.44
RPAIN-208ENST00000571043 HIDE1A8MVS5 230 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 LPXNO60711 386 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 OPHN1O60890 802 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 BANF1O75531 89 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 GCAP28676 217 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 CDK16Q00536 496 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 KLHL38Q2WGJ6 581 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 PLPP4Q5VZY2 271 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 TPGS2Q68CL5 300 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 RNF19BQ6ZMZ0 732 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms