RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 CCDC150Q8NCX0 1101 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 ZNF248Q8NDW4 579 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 RNF139Q8WU17 664 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 SERAC1Q96JX3 654 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 LMLNQ96KR4 655 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 LGMNQ99538 433 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 MTG2Q9H4K7 406 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 MTMR6Q9Y217 621 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 MGAQ8IWI9 3026 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 TARSL2A2RTX5 802 aaKnown RBP12.96□□□□□ -0.33
SNX29-207ENST00000568949 CYSRT1A8MQ03 144 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 IRAK2O43187 625 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 LATO43561 262 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 RNASEH2AO75792 299 aaKnown RBP12.96□□□□□ -0.33
SNX29-207ENST00000568949 GOT1P17174 413 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 SLC8A1P32418 973 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 SGSHP51688 502 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 TMPRSS3P57727 454 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 ENPEPQ07075 957 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 STK4Q13043 487 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 CUL4BQ13620 913 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 PROX2Q3B8N5 592 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 C9orf64Q5T6V5 341 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 PIK3R6Q5UE93 754 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 BROXQ5VW32 411 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 CEP135Q66GS9 1140 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 SND1Q7KZF4 910 aaKnown RBP eCLIP12.96□□□□□ -0.33
SNX29-207ENST00000568949 IQCHQ86VS3 1027 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 SLC4A11Q8NBS3 891 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 KIAA0895Q8NCT3 520 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 FIBINQ8TAL6 211 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 WFDC5Q8TCV5 224 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 TAS1R2Q8TE23 839 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 MRGPRX3Q96LB0 322 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 ZNF578Q96N58 590 aaPredicted RBP12.96□□□□□ -0.33
SNX29-207ENST00000568949 OMDQ99983 421 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 ULBP1Q9BZM6 244 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
SNX29-207ENST00000568949 XPO1O14980 1071 aaKnown RBP12.95□□□□□ -0.34
SNX29-207ENST00000568949 KLRC4O43908 158 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 MAGEC1O60732 1142 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 TBL1XO60907 577 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 YEATS4O95619 227 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 MT-CO3P00414 261 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 NUDT1P36639 197 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 AFMP43652 599 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 GCLMP48507 274 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 RAD23BP54727 409 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 ADPRHP54922 357 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 PCBP4P57723 403 aaKnown RBP12.95□□□□□ -0.34
SNX29-207ENST00000568949 PPP3CAQ08209 521 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 OVGP1Q12889 678 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 BSPRYQ5W0U4 402 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 NAPEPLDQ6IQ20 393 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 INTS8Q75QN2 995 aaKnown RBP12.95□□□□□ -0.34
SNX29-207ENST00000568949 SPATS2Q86XZ4 545 aaKnown RBP12.95□□□□□ -0.34
SNX29-207ENST00000568949 MMAAQ8IVH4 418 aaKnown RBP12.95□□□□□ -0.34
SNX29-207ENST00000568949 MFN1Q8IWA4 741 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 DHX40Q8IX18 779 aaKnown RBP12.95□□□□□ -0.34
SNX29-207ENST00000568949 LSMEM2Q8N112 164 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 NDRG1Q92597 394 aaKnown RBP12.95□□□□□ -0.34
SNX29-207ENST00000568949 AZIN2Q96A70 460 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 HIC2Q96JB3 615 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 ZNF396Q96N95 335 aaPredicted RBP12.95□□□□□ -0.34
SNX29-207ENST00000568949 CLMPQ9H6B4 373 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 LRRC4Q9HBW1 653 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 CISHQ9NSE2 258 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 ABCC13Q9NSE7 274 aa12.95□□□□□ -0.34
SNX29-207ENST00000568949 B8ZZF3 427 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 CALUO43852 315 aaPredicted RBP12.94□□□□□ -0.34
SNX29-207ENST00000568949 DXOO77932 396 aaKnown RBP12.94□□□□□ -0.34
SNX29-207ENST00000568949 ADH1BP00325 375 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 IGLV3-27P01718 113 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 SRPRAP08240 638 aaKnown RBP12.94□□□□□ -0.34
SNX29-207ENST00000568949 PDIA4P13667 645 aaKnown RBP12.94□□□□□ -0.34
SNX29-207ENST00000568949 C5AR1P21730 350 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 CSKP41240 450 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 SLC11A2P49281 568 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 ZNF211Q13398 564 aaPredicted RBP12.94□□□□□ -0.34
SNX29-207ENST00000568949 NUGGCQ68CJ6 796 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 MSANTD2Q6P1R3 559 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 RFWD3Q6PCD5 774 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 KDM7AQ6ZMT4 941 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 UNC45BQ8IWX7 931 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 SCML4Q8N228 414 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 AADATQ8N5Z0 425 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 OR14C36Q8NHC7 312 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 SNRNP27Q8WVK2 155 aaKnown RBP12.94□□□□□ -0.34
SNX29-207ENST00000568949 EDEM1Q92611 657 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 IPO9Q96P70 1041 aaKnown RBP12.94□□□□□ -0.34
SNX29-207ENST00000568949 EXOC1Q9NV70 894 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 INTS6Q9UL03 887 aaKnown RBP12.94□□□□□ -0.34
SNX29-207ENST00000568949 TRAF3IP3Q9Y228 551 aa12.94□□□□□ -0.34
SNX29-207ENST00000568949 HECTD1Q9ULT8 2610 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 ITIH6Q6UXX5 1313 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
SNX29-207ENST00000568949 EDDM13A0A1B0GTR0 161 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 GOLGA6L7A0A1B0GV03 622 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 YJEFN3A6XGL0 299 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms