RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PIK3R6Q5UE93 754 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 SPATS2Q86XZ4 545 aaKnown RBP15.44■□□□□ 0.06
USB1-214ENST00000568848 ARHGAP18Q8N392 663 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 CARNMT1Q8N4J0 409 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 SAP25Q8TEE9 199 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 TFAP2BQ92481 460 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 UBL7Q96S82 380 aaPredicted RBP15.44■□□□□ 0.06
USB1-214ENST00000568848 NUCKS1Q9H1E3 243 aaKnown RBP15.44■□□□□ 0.06
USB1-214ENST00000568848 SGK2Q9HBY8 427 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 OSGEPQ9NPF4 335 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 SLCO3A1Q9UIG8 710 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 COL5A1P20908 1838 aaPredicted RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 XPO1O14980 1071 aaKnown RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 ZSCAN22P10073 491 aaPredicted RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 PLA2G2AP14555 144 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 TRIM21P19474 475 aaKnown RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 MAT2AP31153 395 aaKnown RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 MXI1P50539 228 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 DAOAP59103 153 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 RACK1P63244 317 aaKnown RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 ADAM9Q13443 819 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 CST6Q15828 149 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 C9orf64Q5T6V5 341 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 FBXL19Q6PCT2 694 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 INTS8Q75QN2 995 aaKnown RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 CIR1Q86X95 450 aaPredicted RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 MFN1Q8IWA4 741 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 APCDD1Q8J025 514 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 STK40Q8N2I9 435 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 TMEM174Q8WUU8 243 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 KAT5Q92993 513 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 NXPE2Q96DL1 559 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 RPL10LQ96L21 214 aaKnown RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 IPO9Q96P70 1041 aaKnown RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 MYOCQ99972 504 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 RAB20Q9NX57 234 aa15.43■□□□□ 0.06
USB1-214ENST00000568848 HBS1LQ9Y450 684 aaKnown RBP15.43■□□□□ 0.06
USB1-214ENST00000568848 MAST4O15021 2626 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 BRINP1O60477 761 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 MOCS2O96007 188 aaPredicted RBP15.42■□□□□ 0.06
USB1-214ENST00000568848 EPHA8P29322 1005 aaPredicted RBP15.42■□□□□ 0.06
USB1-214ENST00000568848 PSMC2P35998 433 aaKnown RBP15.42■□□□□ 0.06
USB1-214ENST00000568848 C19orf57Q0VDD7 668 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 DCAF17Q5H9S7 520 aaPredicted RBP15.42■□□□□ 0.06
USB1-214ENST00000568848 KRT39Q6A163 491 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 TMPRSS12Q86WS5 348 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 SIX6OS1Q8N1H7 587 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 ZNF843Q8N446 348 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 CCDC150Q8NCX0 1101 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 SNX21Q969T3 373 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 STOML2Q9UJZ1 356 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 PCDHB1Q9Y5F3 818 aa15.42■□□□□ 0.06
USB1-214ENST00000568848 TDRD6O60522 2096 aaKnown RBP15.41■□□□□ 0.06
USB1-214ENST00000568848 ATXN7O15265 892 aaPredicted RBP15.41■□□□□ 0.06
USB1-214ENST00000568848 ACSL4O60488 711 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 IGLV3-27P01718 113 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 ATP5BP06576 529 aaKnown RBP15.41■□□□□ 0.06
USB1-214ENST00000568848 CD38P28907 300 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 SLC8A1P32418 973 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 NDUFA8P51970 172 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 ADPRHP54922 357 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 BST2Q10589 180 aaKnown RBP15.41■□□□□ 0.06
USB1-214ENST00000568848 HNRNPA1L2Q32P51 320 aaKnown RBP15.41■□□□□ 0.06
USB1-214ENST00000568848 ZCWPW2Q504Y3 356 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 SGO2Q562F6 1265 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 PITRM1Q5JRX3 1037 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 C6orf118Q5T5N4 469 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 PMF1Q6P1K2 205 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 FBXL13Q8NEE6 735 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 OR14C36Q8NHC7 312 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 SERAC1Q96JX3 654 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 FAM129BQ96TA1 746 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 OMDQ99983 421 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.41■□□□□ 0.06
USB1-214ENST00000568848 UBXN6Q9BZV1 441 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 MIS12Q9H081 205 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 GOLPH3LQ9H4A5 285 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 ERVW-1Q9UQF0 538 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 NCKAP1Q9Y2A7 1128 aa15.41■□□□□ 0.06
USB1-214ENST00000568848 RNF225M0QZC1 329 aaPredicted RBP15.4■□□□□ 0.06
USB1-214ENST00000568848 O00370 1275 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 PAPSS1O43252 624 aaPredicted RBP15.4■□□□□ 0.06
USB1-214ENST00000568848 RTN2O75298 545 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 C7P10643 843 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 BRD2P25440 801 aaKnown RBP15.4■□□□□ 0.06
USB1-214ENST00000568848 TBX4P57082 545 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 NXPH1P58417 271 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 PITX1P78337 314 aaPredicted RBP15.4■□□□□ 0.06
USB1-214ENST00000568848 ZBTB16Q05516 673 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 DPYDQ12882 1025 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 CUL2Q13617 745 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 KDM7AQ6ZMT4 941 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 KANSL1Q7Z3B3 1105 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 OR2T34Q8NGX1 318 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 TSC1Q92574 1164 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 KLK6Q92876 244 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 TTC17Q96AE7 1141 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 FCRL2Q96LA5 508 aaPredicted RBP15.4■□□□□ 0.06
USB1-214ENST00000568848 GDF3Q9NR23 364 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 OLA1Q9NTK5 396 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms