RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ARTNQ5T4W7 220 aa19.31■□□□□ 0.68
COMMD4-213ENST00000565834 FBXL22Q6P050 247 aa19.31■□□□□ 0.68
COMMD4-213ENST00000565834 GSTA5Q7RTV2 222 aa19.31■□□□□ 0.68
COMMD4-213ENST00000565834 CMTM8Q8IZV2 173 aa19.31■□□□□ 0.68
COMMD4-213ENST00000565834 ADAMTS19Q8TE59 1207 aa19.31■□□□□ 0.68
COMMD4-213ENST00000565834 RUBCNQ92622 972 aa19.31■□□□□ 0.68
COMMD4-213ENST00000565834 WBP2Q969T9 261 aa19.31■□□□□ 0.68
COMMD4-213ENST00000565834 TRIM51Q9BSJ1 452 aa19.31■□□□□ 0.68
COMMD4-213ENST00000565834 ZYG11BQ9C0D3 744 aa19.31■□□□□ 0.68
COMMD4-213ENST00000565834 LSM7Q9UK45 103 aaKnown RBP19.31■□□□□ 0.68
COMMD4-213ENST00000565834 AGO1Q9UL18 857 aaKnown RBP19.31■□□□□ 0.68
COMMD4-213ENST00000565834 COLQQ9Y215 455 aaPredicted RBP19.31■□□□□ 0.68
COMMD4-213ENST00000565834 UTP11Q9Y3A2 253 aaKnown RBP19.31■□□□□ 0.68
COMMD4-213ENST00000565834 IGLV3-10A0A075B6K4 115 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 GOLGA6L7A0A1B0GV03 622 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 LATS1O95835 1130 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 GUCY2DQ02846 1103 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 XRCC4Q13426 336 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 FAM133BQ5BKY9 247 aaKnown RBP19.3■□□□□ 0.68
COMMD4-213ENST00000565834 DARS2Q6PI48 645 aaKnown RBP19.3■□□□□ 0.68
COMMD4-213ENST00000565834 SYDE1Q6ZW31 735 aaPredicted RBP19.3■□□□□ 0.68
COMMD4-213ENST00000565834 LGI2Q8N0V4 545 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 RPRD1AQ96P16 312 aaPredicted RBP19.3■□□□□ 0.68
COMMD4-213ENST00000565834 PNKPQ96T60 521 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 DDX50Q9BQ39 737 aaKnown RBP19.3■□□□□ 0.68
COMMD4-213ENST00000565834 TMEM121Q9BTD3 319 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 PARD6BQ9BYG5 372 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 RAB17Q9H0T7 212 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 MPP6Q9NZW5 540 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 ARHGAP26Q9UNA1 814 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 RAD54BQ9Y620 910 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 SGK1O00141 431 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 LINC01565O15544 149 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 RHOQP17081 205 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 CEBPBP17676 345 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 SLC6A4P31645 630 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 ZXDBP98169 803 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 ADGRF1Q5T601 910 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 DDX42Q86XP3 938 aaKnown RBP eCLIP19.3■□□□□ 0.68
COMMD4-213ENST00000565834 ALLCQ8N6M5 410 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 NPWQ8N729 165 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 RTL3Q8N8U3 475 aaKnown RBP19.3■□□□□ 0.68
COMMD4-213ENST00000565834 TTC16Q8NEE8 873 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 IGSF8Q969P0 613 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 OLFM3Q96PB7 478 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 HINFPQ9BQA5 517 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 CFAP97Q9P2B7 532 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 SH3BP1Q9Y3L3 701 aa19.3■□□□□ 0.68
COMMD4-213ENST00000565834 ZSCAN5CA6NGD5 496 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-213ENST00000565834 DRGXA6NNA5 263 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 WASH4PA8MWX3 477 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 TUBBP07437 444 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 PDK1Q15118 436 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 KCTD19Q17RG1 926 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-213ENST00000565834 ANKRD54Q6NXT1 300 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 RFWD3Q6PCD5 774 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 CDKL3Q8IVW4 592 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-213ENST00000565834 IFT20Q8IY31 132 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 LZTR1Q8N653 840 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 RSAD2Q8WXG1 361 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 ING5Q8WYH8 240 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 ERP44Q9BS26 406 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 SMG9Q9H0W8 520 aaKnown RBP19.29■□□□□ 0.68
COMMD4-213ENST00000565834 TTYH1Q9H313 450 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-213ENST00000565834 C10orf88Q9H8K7 445 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 EPB41L5Q9HCM4 733 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 DONSONQ9NYP3 566 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 STOML2Q9UJZ1 356 aa19.29■□□□□ 0.68
COMMD4-213ENST00000565834 LEFTY2O00292 366 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 PPP1R12AO14974 1030 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-213ENST00000565834 GREM1O60565 184 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 MCM3P25205 808 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 IRAK1P51617 712 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 PTK6Q13882 451 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 C5orf22Q49AR2 442 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 RABGAP1LQ5R372 815 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 Q6ZNB5 142 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 NLRP14Q86W24 1093 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 CCDC33Q8N5R6 958 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 ITFG1Q8TB96 612 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 NUP210Q8TEM1 1887 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-213ENST00000565834 QKIQ96PU8 341 aaKnown RBP eCLIP19.28■□□□□ 0.68
COMMD4-213ENST00000565834 APOL5Q9BWW9 433 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 TMEM248Q9NWD8 314 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 ZNF510Q9Y2H8 683 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 SHROOM3Q8TF72 1996 aa19.28■□□□□ 0.68
COMMD4-213ENST00000565834 ESYT3A0FGR9 886 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 BCLAF3A2AJT9 711 aaKnown RBP19.27■□□□□ 0.68
COMMD4-213ENST00000565834 CFAP69A5D8W1 941 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 HACD1B0YJ81 288 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 NCAM2O15394 837 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 CNTN5O94779 1100 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 MX2P20592 715 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 VSNL1P62760 191 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 GRIN2CQ14957 1233 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 ALFQ53S48 1182 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 SLC45A4Q5BKX6 768 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 WDR93Q6P2C0 686 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 HTR3DQ70Z44 454 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 B4GALNT4Q76KP1 1039 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms