RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 FAM114A1Q8IWE2 563 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 SHC3Q92529 594 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 NOX5Q96PH1 765 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 CRACR2AQ9BSW2 395 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 MIR1-1HGQ9H1L0 117 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 RSPH9Q9H1X1 276 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 FSCN3Q9NQT6 498 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 STIM2Q9P246 746 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 PCDHGB2Q9Y5G2 931 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 KCNU1A8MYU2 1149 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 E5RJQ4 531 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 SEMA4FO95754 770 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 CALCAP01258 141 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 SLC9A1P19634 815 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 ABCB4P21439 1286 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 PON1P27169 355 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 NNMTP40261 264 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 CSKP41240 450 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 MATKP42679 507 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 RPS24P62847 133 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 ECT2LQ008S8 904 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 SULT2A1Q06520 285 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 SUZ12Q15022 739 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 TRIP6Q15654 476 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 HNRNPA1L2Q32P51 320 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 DCAF6Q58WW2 860 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 CT47A1Q5JQC4 288 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 UNQ6494/PRO21346Q6UXR6 183 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 DBX2Q6ZNG2 339 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 GLRX5Q86SX6 157 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 TAC4Q86UU9 113 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 CARNMT1Q8N4J0 409 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 ZCCHC9Q8N567 271 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 PPP1R13BQ96KQ4 1090 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 SCNM1Q9BWG6 230 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 ADAM33Q9BZ11 813 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 EIF2B4Q9UI10 523 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 ERVW-1Q9UQF0 538 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 MSRB2Q9Y3D2 182 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 KNL1Q8NG31 2342 aa12.61□□□□□ -0.39
GTF3C1-204ENST00000564664 SPAARA0A1B0GVQ0 90 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 BECN2A8MW95 431 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 F5H5T6 163 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 SH3BP5O60239 455 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 DFNA5O60443 496 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 HSF2BPO75031 334 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 KRT37O76014 449 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 TACR2P21452 398 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 CD27P26842 260 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 ERCC5P28715 1186 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 CCR1P32246 355 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 ACSL1P33121 698 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 KRT9P35527 623 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 USP8P40818 1118 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 MTIF2P46199 727 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 PLK1P53350 603 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 PDCLQ13371 301 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 CAMK4Q16566 473 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 TPD52L1Q16890 204 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 ARHGAP44Q17R89 818 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 ZC3H12AQ5D1E8 599 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 PITRM1Q5JRX3 1037 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 RABGAP1LQ5R372 815 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 C9orf64Q5T6V5 341 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 ACBD5Q5T8D3 534 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 RNF219Q5W0B1 726 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 C11orf57Q6ZUT1 292 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 FAM124AQ86V42 546 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 ZDHHC17Q8IUH5 632 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 NAXDQ8IW45 347 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 LGI2Q8N0V4 545 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 WDTC1Q8N5D0 677 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 ADAM32Q8TC27 787 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 WFDC5Q8TCV5 224 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 MYO19Q96H55 970 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 MRGPRX3Q96LB0 322 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 PRICKLE1Q96MT3 831 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 SLC2A13Q96QE2 648 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 PABPC3Q9H361 631 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 C6orf106Q9H6K1 298 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 GAREM1Q9H706 876 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 RRN3Q9NYV6 651 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 DACH1Q9UI36 760 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 CYTH4Q9UIA0 394 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 INTS6Q9UL03 887 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 CEP83Q9Y592 693 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 USP24Q9UPU5 2620 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 ADAMTS9Q9P2N4 1935 aa12.6□□□□□ -0.39
GTF3C1-204ENST00000564664 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 MOCS2O96007 188 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 GRIA4P48058 902 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 MAN2A1Q16706 1144 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 HLA-BQ31612 363 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 FSCBQ5H9T9 825 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms