RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 AP1B1Q10567 949 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 KCNJ11Q14654 390 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 TPSAB1Q15661 275 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 C6orf118Q5T5N4 469 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 RWDD4Q6NW29 188 aaKnown RBP16.01■□□□□ 0.15
COMMD4-210ENST00000564587 RTL10Q7L3V2 364 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 CCNYQ8ND76 341 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 AZIN2Q96A70 460 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 EPB41L4BQ9H329 900 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 PPCSQ9HAB8 311 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 RAB6BQ9NRW1 208 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 XPO7Q9UIA9 1087 aaKnown RBP16.01■□□□□ 0.15
COMMD4-210ENST00000564587 TRHDEQ9UKU6 1024 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 HS3ST4Q9Y661 456 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 PTPRSQ13332 1948 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 GOLGA6CA6NDK9 693 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 E7ESA3 106 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 E9PAM4 449 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 TCEA3O75764 348 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 C1RP00736 705 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 ADH1AP07327 375 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 GOLGA6DP0CG33 693 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 SRGAP2BP0DMP2 458 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 ATP2A2P16615 1042 aaKnown RBP16■□□□□ 0.15
COMMD4-210ENST00000564587 RHOQP17081 205 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 HMGA1P17096 107 aaKnown RBP16■□□□□ 0.15
COMMD4-210ENST00000564587 UBE3AQ05086 875 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 STAT4Q14765 748 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 KCTD19Q17RG1 926 aaPredicted RBP16■□□□□ 0.15
COMMD4-210ENST00000564587 PARP6Q2NL67 630 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 KRT71Q3SY84 523 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 PABPC1LQ4VXU2 614 aaKnown RBP16■□□□□ 0.15
COMMD4-210ENST00000564587 ANKRD20A2Q5SQ80 823 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 ANKRD20A1Q5TYW2 823 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 ANKRD20A3Q5VUR7 823 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 CCDC149Q6ZUS6 474 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 C7orf61Q8IZ16 206 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 PLD4Q96BZ4 506 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 P2RY11Q96G91 374 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 ATP6V1G3Q96LB4 118 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 TSGA13Q96PP4 275 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 LBHD1Q9BQE6 289 aaPredicted RBP16■□□□□ 0.15
COMMD4-210ENST00000564587 EMILIN2Q9BXX0 1053 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 NACA2Q9H009 215 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 SAYSD1Q9NPB0 183 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 EIF2B3Q9NR50 452 aaKnown RBP16■□□□□ 0.15
COMMD4-210ENST00000564587 GOLGA6AQ9NYA3 693 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 NINJ2Q9NZG7 142 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 NUDT5Q9UKK9 219 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 INSL5Q9Y5Q6 135 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 IRAK3Q9Y616 596 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 ALPK3Q96L96 1907 aa16■□□□□ 0.15
COMMD4-210ENST00000564587 A0A087WUV0 522 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-210ENST00000564587 ZNF840PA6NDX5 716 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 A6NNZ2 444 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 E7EVH7 732 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 TEX28O15482 410 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 TLL1O43897 1013 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 MAP3K6O95382 1288 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 MOCS2O96007 188 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-210ENST00000564587 CCNCP24863 283 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 PHBP35232 272 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 BMPR1AP36894 532 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 GARSP41250 739 aaKnown RBP15.99■□□□□ 0.15
COMMD4-210ENST00000564587 GABPB1Q06547 395 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-210ENST00000564587 SEMA5AQ13591 1074 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 TUBB8Q3ZCM7 444 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 DNAJC21Q5F1R6 531 aaKnown RBP15.99■□□□□ 0.15
COMMD4-210ENST00000564587 ITPRIPL1Q6GPH6 555 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 CCDC13Q8IYE1 715 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 RTL3Q8N8U3 475 aaKnown RBP15.99■□□□□ 0.15
COMMD4-210ENST00000564587 KLHL23Q8NBE8 558 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 FAM76AQ8TAV0 307 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 CCDC110Q8TBZ0 833 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 PSMG2Q969U7 264 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 LRRC39Q96DD0 335 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 PPP1R2P1Q96PQ5 205 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 LGMNQ99538 433 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 ZYG11BQ9C0D3 744 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 ETNK1Q9HBU6 452 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 XAB2Q9HCS7 855 aaKnown RBP15.99■□□□□ 0.15
COMMD4-210ENST00000564587 VPS18Q9P253 973 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 IGSF9Q9P2J2 1179 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 MFHAS1Q9Y4C4 1052 aa15.99■□□□□ 0.15
COMMD4-210ENST00000564587 IGLV3-10A0A075B6K4 115 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 A0A0C4DFX4 3053 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 RNF103O00237 685 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 POLR3GO15318 223 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-210ENST00000564587 PSMD3O43242 534 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 LPXNO60711 386 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 SPAG6O75602 509 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 CXCL14O95715 111 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 LINC00271P0C7V0 271 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 VAV1P15498 845 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 DNAJB2P25686 324 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 ATP5DP30049 168 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 SLC11A2P49281 568 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 HARS2P49590 506 aaKnown RBP15.98■□□□□ 0.15
COMMD4-210ENST00000564587 NDST2P52849 883 aa15.98■□□□□ 0.15
COMMD4-210ENST00000564587 TWF1Q12792 350 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms