RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
RNF40-205ENST00000563909 OPA1O60313 960 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 CSO75390 466 aaKnown RBP16.6■□□□□ 0.25
RNF40-205ENST00000563909 BEST1O76090 585 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 TNNI1P19237 187 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 PRCPP42785 496 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 DAB2P98082 770 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 KCNJ12Q14500 433 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 C4orf17Q53FE4 359 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 ZNF776Q68DI1 518 aaPredicted RBP16.6■□□□□ 0.25
RNF40-205ENST00000563909 KLHDC10Q6PID8 442 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 C12orf56Q8IXR9 622 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 SMYD4Q8IYR2 804 aaPredicted RBP16.6■□□□□ 0.25
RNF40-205ENST00000563909 FUKQ8N0W3 1084 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 OXR1Q8N573 874 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 ZMIZ2Q8NF64 920 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 DDI1Q8WTU0 396 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 GOLGA1Q92805 767 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 KCTD10Q9H3F6 313 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 NMUR1Q9HB89 426 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 KIAA1586Q9HCI6 787 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 AGPAT3Q9NRZ7 376 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.6■□□□□ 0.253e-6■□□□□ 9.8
RNF40-205ENST00000563909 FBXL12Q9NXK8 326 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 HSPBP1Q9NZL4 362 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 SCML2Q9UQR0 700 aa16.6■□□□□ 0.25
RNF40-205ENST00000563909 ANKRD17O75179 2603 aaKnown RBP16.6■□□□□ 0.25
RNF40-205ENST00000563909 A0A1W2PQH9 124 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 SDC3O75056 442 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 HMBSP08397 361 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 DLATP10515 647 aaKnown RBP16.59■□□□□ 0.25
RNF40-205ENST00000563909 RBMS1P29558 406 aaKnown RBP16.59■□□□□ 0.25
RNF40-205ENST00000563909 MAP3K7CLP57077 242 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 ZNF211Q13398 564 aaPredicted RBP16.59■□□□□ 0.25
RNF40-205ENST00000563909 SGO2Q562F6 1265 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 SLC45A4Q5BKX6 768 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 RBM43Q6ZSC3 357 aaKnown RBP16.59■□□□□ 0.25
RNF40-205ENST00000563909 USP30Q70CQ3 517 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 RDH13Q8NBN7 331 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 CCDC97Q96F63 343 aaPredicted RBP16.59■□□□□ 0.25
RNF40-205ENST00000563909 DHTKD1Q96HY7 919 aaPredicted RBP16.59■□□□□ 0.25
RNF40-205ENST00000563909 SERAC1Q96JX3 654 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
RNF40-205ENST00000563909 SEPT3Q9UH03 358 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 TRAF3IP3Q9Y228 551 aa16.59■□□□□ 0.25
RNF40-205ENST00000563909 ARID1BQ8NFD5 2236 aaPredicted RBP16.59■□□□□ 0.25
RNF40-205ENST00000563909 LRRC72A6NJI9 287 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 PSMA7O14818 248 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 CLIC2O15247 247 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 BMP6P22004 513 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 CORO1AP31146 461 aaKnown RBP16.58■□□□□ 0.24
RNF40-205ENST00000563909 NFKBIBQ15653 356 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 SNRNP35Q16560 246 aaKnown RBP16.58■□□□□ 0.24
RNF40-205ENST00000563909 ARL13BQ3SXY8 428 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 LINC00303Q3SY05 128 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 CAVIN1Q6NZI2 390 aaKnown RBP16.58■□□□□ 0.24
RNF40-205ENST00000563909 SPATS2Q86XZ4 545 aaKnown RBP16.58■□□□□ 0.24
RNF40-205ENST00000563909 DENND1CQ8IV53 801 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 TMEM174Q8WUU8 243 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 CCDC127Q96BQ5 260 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 TNIP3Q96KP6 325 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 TSG101Q99816 390 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 ARHGAP9Q9BRR9 750 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 DCLK3Q9C098 648 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 SERGEFQ9UGK8 458 aa16.58■□□□□ 0.24
RNF40-205ENST00000563909 AGO1Q9UL18 857 aaKnown RBP16.58■□□□□ 0.24
RNF40-205ENST00000563909 BSNQ9UPA5 3926 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 LETM1O95202 739 aaPredicted RBP16.57■□□□□ 0.24
RNF40-205ENST00000563909 CCDC130P13994 396 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 TRPC3Q13507 836 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 NFIL3Q16649 462 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 ZSCAN23Q3MJ62 389 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 GPRIN1Q7Z2K8 1008 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 TMC6Q7Z403 805 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 ACOT1Q86TX2 421 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 SLC9A9Q8IVB4 645 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 MLKLQ8NB16 471 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 XXYLT1Q8NBI6 393 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 OR2T34Q8NGX1 318 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 SLC2A14Q8TDB8 520 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 JAKMIP2Q96AA8 810 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 SLC46A1Q96NT5 459 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 CGRRF1Q99675 332 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 ABCG4Q9H172 646 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 OSBPL2Q9H1P3 480 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 RSPH9Q9H1X1 276 aaPredicted RBP16.57■□□□□ 0.24
RNF40-205ENST00000563909 NEUROG2Q9H2A3 272 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 MTG2Q9H4K7 406 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 SMYD3Q9H7B4 428 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 CSNK1G1Q9HCP0 422 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 NAGPAQ9UK23 515 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 SCML1Q9UN30 329 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 SATB2Q9UPW6 733 aa16.57■□□□□ 0.24
RNF40-205ENST00000563909 PPP1R3GB7ZBB8 358 aa16.56■□□□□ 0.24
RNF40-205ENST00000563909 RNASEH2AO75792 299 aaKnown RBP16.56■□□□□ 0.24
RNF40-205ENST00000563909 NR3C1P04150 777 aa16.56■□□□□ 0.24
RNF40-205ENST00000563909 CD44P16070 742 aaKnown RBP16.56■□□□□ 0.24
RNF40-205ENST00000563909 ITGB6P18564 788 aa16.56■□□□□ 0.24
RNF40-205ENST00000563909 CR2P20023 1033 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms