RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 SHBGP04278 402 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 RING1Q06587 406 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 GALNT2Q10471 571 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 AUHQ13825 339 aaKnown RBP18.56■□□□□ 0.56
COMMD4-208ENST00000563220 KCNJ11Q14654 390 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 SYCP2LQ5T4T6 812 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 TRMT10CQ7L0Y3 403 aaKnown RBP18.56■□□□□ 0.56
COMMD4-208ENST00000563220 TMEM150AQ86TG1 271 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 RELL1Q8IUW5 271 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 SPPL3Q8TCT6 385 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 DEPDC1BQ8WUY9 529 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 ARL8AQ96BM9 186 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 BTN2A3PQ96KV6 586 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 CDK5RAP1Q96SZ6 601 aaKnown RBP18.56■□□□□ 0.56
COMMD4-208ENST00000563220 C17orf80Q9BSJ5 609 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 ETNK1Q9HBU6 452 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 VANGL2Q9ULK5 521 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 HIDE1A8MVS5 230 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 NUDT17P0C025 328 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 SERPINB6P35237 376 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 ZNF844Q08AG5 666 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 WASHC5Q12768 1159 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 KYNUQ16719 465 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 ANKRD20A2Q5SQ80 823 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 CEP85LQ5SZL2 805 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 ANKRD20A1Q5TYW2 823 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 ANKRD20A3Q5VUR7 823 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 UHMK1Q8TAS1 419 aaKnown RBP18.56■□□□□ 0.56
COMMD4-208ENST00000563220 POF1BQ8WVV4 589 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 DPF3Q92784 378 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 RNF38Q9H0F5 515 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 CATSPERBQ9H7T0 1116 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 ZNF334Q9HCZ1 680 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-208ENST00000563220 PSD3Q9NYI0 1048 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 LZTS1Q9Y250 596 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 HBS1LQ9Y450 684 aaKnown RBP18.56■□□□□ 0.56
COMMD4-208ENST00000563220 A0A0A0MRY4 1105 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 C2orf78A6NCI8 922 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 GRXCR1A8MXD5 290 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 POLR3GO15318 223 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-208ENST00000563220 NCAM2O15394 837 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 FGF10O15520 208 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-208ENST00000563220 OPA1O60313 960 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 GARSP41250 739 aaKnown RBP18.55■□□□□ 0.56
COMMD4-208ENST00000563220 IRAK1P51617 712 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 KPNA1P52294 538 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-208ENST00000563220 PPIDQ08752 370 aaKnown RBP18.55■□□□□ 0.56
COMMD4-208ENST00000563220 C9orf50Q5SZB4 431 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 FNBP1LQ5T0N5 605 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 DENND2CQ68D51 928 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 KLHDC10Q6PID8 442 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 TADA2BQ86TJ2 420 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 ARHGAP12Q8IWW6 846 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 SPATA13Q96N96 652 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 PRMT1Q99873 361 aaKnown RBP18.55■□□□□ 0.56
COMMD4-208ENST00000563220 CEP41Q9BYV8 373 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 MTIF3Q9H2K0 278 aaKnown RBP18.55■□□□□ 0.56
COMMD4-208ENST00000563220 SAYSD1Q9NPB0 183 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 NINJ2Q9NZG7 142 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 SEPT10Q9P0V9 454 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 IRAK3Q9Y616 596 aa18.55■□□□□ 0.56
COMMD4-208ENST00000563220 GOLGA6L7A0A1B0GV03 622 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 C2orf71A6NGG8 1288 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 KCNK1O00180 336 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 RNF103O00237 685 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 CHADO15335 359 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 TTC4O95801 387 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 F11P03951 625 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 MX2P20592 715 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 MAGEA4P43358 317 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 FASTKD3Q14CZ7 662 aaKnown RBP18.54■□□□□ 0.56
COMMD4-208ENST00000563220 MSS51Q4VC12 460 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 PLPP4Q5VZY2 271 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 RAP1GAP2Q684P5 730 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 NADSYN1Q6IA69 706 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 FAM109BQ6ICB4 259 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-208ENST00000563220 FBXL22Q6P050 247 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 NLRP14Q86W24 1093 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 MRPL43Q8N983 215 aaKnown RBP18.54■□□□□ 0.56
COMMD4-208ENST00000563220 IGSF8Q969P0 613 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 HDAC11Q96DB2 347 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 C9orf72Q96LT7 481 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 NACA2Q9H009 215 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 ENTPD7Q9NQZ7 604 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 WASH4PA8MWX3 477 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 SMAPO00193 183 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 RNF40O75150 1001 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 BANF1O75531 89 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 ACSL3O95573 720 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 ADH1AP07327 375 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 TTMPQ5BVD1 217 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 HP1BP3Q5SSJ5 553 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-208ENST00000563220 C4orf22Q6V702 233 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 ZNF567Q8N184 647 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 RTL3Q8N8U3 475 aaKnown RBP18.54■□□□□ 0.56
COMMD4-208ENST00000563220 EXOC4Q96A65 974 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 MYEOVQ96EZ4 313 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 SLC39A8Q9C0K1 460 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 BRD8Q9H0E9 1235 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 IL21Q9HBE4 155 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms