RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MS4A13Q5J8X5 152 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 SH3PXD2AQ5TCZ1 1133 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 RFWD3Q6PCD5 774 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 TMEM92Q6UXU6 159 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 ZNF557Q8N988 423 aaPredicted RBP17.15■□□□□ 0.34
CDT1-202ENST00000562747 IL17RCQ8NAC3 791 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 HJURPQ8NCD3 748 aaPredicted RBP17.15■□□□□ 0.34
CDT1-202ENST00000562747 RNF34Q969K3 372 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 TMEM121BQ9BXQ6 578 aaPredicted RBP17.15■□□□□ 0.34
CDT1-202ENST00000562747 XPO4Q9C0E2 1151 aaKnown RBP17.15■□□□□ 0.34
CDT1-202ENST00000562747 HAUS4Q9H6D7 363 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 METTL5Q9NRN9 209 aaKnown RBP17.15■□□□□ 0.34
CDT1-202ENST00000562747 ITIH6Q6UXX5 1313 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 AKAP13Q12802 2813 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 SYNJ2BP-COX16A0A087WUM0 186 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 PRRT4C9JH25 899 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 FLT3P36888 993 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 SGSHP51688 502 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 KLHL30Q0D2K2 578 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 FOXC1Q12948 553 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 USP39Q53GS9 565 aaKnown RBP17.14■□□□□ 0.33
CDT1-202ENST00000562747 EOGTQ5NDL2 527 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 BRMS1LQ5PSV4 323 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 EMC10Q5UCC4 262 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 OTUD1Q5VV17 481 aaPredicted RBP17.14■□□□□ 0.33
CDT1-202ENST00000562747 E4F1Q66K89 784 aaPredicted RBP17.14■□□□□ 0.33
CDT1-202ENST00000562747 ACAD10Q6JQN1 1059 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 UNQ6494/PRO21346Q6UXR6 183 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 SND1Q7KZF4 910 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDT1-202ENST00000562747 MON1BQ7L1V2 547 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 CYP2U1Q7Z449 544 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 ANKS1BQ7Z6G8 1248 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 ALLCQ8N6M5 410 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 FRMD1Q8N878 549 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 ZNF513Q8N8E2 541 aaPredicted RBP17.14■□□□□ 0.33
CDT1-202ENST00000562747 RNF214Q8ND24 703 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 OLIG1Q8TAK6 271 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 SYN2Q92777 582 aaPredicted RBP17.14■□□□□ 0.33
CDT1-202ENST00000562747 PRICKLE1Q96MT3 831 aaPredicted RBP17.14■□□□□ 0.33
CDT1-202ENST00000562747 ZDHHC4Q9NPG8 344 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 COX16Q9P0S2 106 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 XPO7Q9UIA9 1087 aaKnown RBP17.14■□□□□ 0.33
CDT1-202ENST00000562747 CLEC4EQ9ULY5 219 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 CAPN11Q9UMQ6 739 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 PAXBP1Q9Y5B6 917 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 SPEGQ15772 3267 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 WDFY3Q8IZQ1 3526 aa17.14■□□□□ 0.33
CDT1-202ENST00000562747 ZZEF1O43149 2961 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 TBL1XO60907 577 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 KLF8O95600 359 aaPredicted RBP17.13■□□□□ 0.33
CDT1-202ENST00000562747 TACR2P21452 398 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 CXCR3P49682 368 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 IRX4P78413 519 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 ZBED6P86452 979 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 DEUP1Q05D60 604 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 EIF4HQ15056 248 aaKnown RBP17.13■□□□□ 0.33
CDT1-202ENST00000562747 E2F5Q15329 346 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 CRY1Q16526 586 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 GEN1Q17RS7 908 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 DAB2IPQ5VWQ8 1189 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 RAP1GAP2Q684P5 730 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 BNIPLQ7Z465 357 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 CHSY1Q86X52 802 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 TXNDC5Q8NBS9 432 aaKnown RBP17.13■□□□□ 0.33
CDT1-202ENST00000562747 C3orf20Q8ND61 904 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 RLN3Q8WXF3 142 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 TBCBQ99426 244 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 WDCPQ9H6R7 721 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 TMEM9BQ9NQ34 198 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 PIGVQ9NUD9 493 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 CALCOCO1Q9P1Z2 691 aa17.13■□□□□ 0.33
CDT1-202ENST00000562747 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDT1-202ENST00000562747 BZW2Q9Y6E2 419 aaKnown RBP17.13■□□□□ 0.33
CDT1-202ENST00000562747 F5H5T6 163 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 SGK1O00141 431 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 KHNYNO15037 678 aaKnown RBP17.12■□□□□ 0.33
CDT1-202ENST00000562747 NPC1O15118 1278 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 KRT3P12035 628 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 TFE3P19532 575 aaPredicted RBP17.12■□□□□ 0.33
CDT1-202ENST00000562747 NTSR1P30989 418 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 DHPSP49366 369 aaPredicted RBP17.12■□□□□ 0.33
CDT1-202ENST00000562747 TRNP1Q6NT89 227 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 ZNF571Q7Z3V5 609 aaPredicted RBP17.12■□□□□ 0.33
CDT1-202ENST00000562747 C11orf74Q86VG3 221 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 MCOLN2Q8IZK6 566 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 LGI2Q8N0V4 545 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDT1-202ENST00000562747 WFIKKN2Q8TEU8 576 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 UCMAQ8WVF2 138 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 VCPIP1Q96JH7 1222 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 CFAP57Q96MR6 1250 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 PRMT1Q99873 361 aaKnown RBP17.12■□□□□ 0.33
CDT1-202ENST00000562747 SELENOOQ9BVL4 669 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 ADAM33Q9BZ11 813 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 ARHGEF38Q9NXL2 777 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 MBD1Q9UIS9 605 aaPredicted RBP17.12■□□□□ 0.33
CDT1-202ENST00000562747 HCN2Q9UL51 889 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 ZMIZ1Q9ULJ6 1067 aa17.12■□□□□ 0.33
CDT1-202ENST00000562747 LUC7L2Q9Y383 392 aaKnown RBP17.12■□□□□ 0.33
CDT1-202ENST00000562747 C2CD4BA6NLJ0 364 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms