RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TSPY8P0CW00 308 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 HSPA8P11142 646 aaKnown RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 VCAM1P19320 739 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 CTGFP29279 349 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 CYP2C18P33260 490 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 PXNP49023 591 aaPredicted RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 LILRA4P59901 499 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 TUBA4AP68366 448 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 NKX6-1P78426 367 aaPredicted RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 SREBF2Q12772 1141 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 ARHGAP40Q5TG30 622 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 C17orf99Q6UX52 265 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 CATSPERGQ6ZRH7 1159 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 FASTKD5Q7L8L6 764 aaKnown RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 YTHDF3Q7Z739 585 aaKnown RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 DGKHQ86XP1 1220 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMG1-206ENST00000562668 ZNF366Q8N895 744 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 ENAHQ8N8S7 591 aaPredicted RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 GMCL1P1Q8NEA9 526 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 ATG4AQ8WYN0 398 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 RPL36ALQ969Q0 106 aaKnown RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 CHMP4CQ96CF2 233 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 HSPBAP1Q96EW2 488 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 MVB12AQ96EY5 273 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 SLC35A4Q96G79 324 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 TMEM47Q9BQJ4 181 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 PTDSS2Q9BVG9 487 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 RNF41Q9H4P4 317 aaPredicted RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 ZNF287Q9HBT7 754 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 PCDH12Q9NPG4 1184 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 DUSP22Q9NRW4 184 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 CLIP2Q9UDT6 1046 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 ADAMTS5Q9UNA0 930 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 SSX2IPQ9Y2D8 614 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 LUC7L2Q9Y383 392 aaKnown RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 TSPY2A6NKD2 308 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 F5H6K3 240 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 H3BUI4 141 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 MYO1FO00160 1098 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 PDHXO00330 501 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 SH2B2O14492 632 aaPredicted RBP5.23□□□□□ -1.57
SMG1-206ENST00000562668 CA12O43570 354 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 REC8O95072 547 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 GRPP07492 148 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 HSPA1AP0DMV8 641 aaKnown RBP5.23□□□□□ -1.57
SMG1-206ENST00000562668 HSPA1BP0DMV9 641 aaKnown RBP5.23□□□□□ -1.57
SMG1-206ENST00000562668 CPA1P15085 419 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 ENGP17813 658 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 MPGP29372 298 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 PTGER1P34995 402 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 VIPR2P41587 438 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 SOX8P57073 446 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 MAP2K1Q02750 393 aaPredicted RBP5.23□□□□□ -1.57
SMG1-206ENST00000562668 KLRC3Q07444 240 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 IQCB1Q15051 598 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 SLC35G1Q2M3R5 365 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 CCDC157Q569K6 752 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 RGS7BPQ6MZT1 257 aaPredicted RBP5.23□□□□□ -1.57
SMG1-206ENST00000562668 C11orf87Q6NUJ2 197 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 CASC1Q6TDU7 716 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 CHST3Q7LGC8 479 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 ZBTB46Q86UZ6 589 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 FBXL16Q8N461 479 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 LRRC71Q8N4P6 559 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 C9orf106Q8NAJ2 232 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 NCOA7Q8NI08 942 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 LPAR1Q92633 364 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 ESR2Q92731 530 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 MTFMTQ96DP5 389 aaKnown RBP5.23□□□□□ -1.57
SMG1-206ENST00000562668 TTC14Q96N46 770 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 NUP88Q99567 741 aaPredicted RBP5.23□□□□□ -1.57
SMG1-206ENST00000562668 P2RX7Q99572 595 aaKnown RBP5.23□□□□□ -1.57
SMG1-206ENST00000562668 FSD1LQ9BXM9 530 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 AGXT2Q9BYV1 514 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 KRT23Q9C075 422 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 LY9Q9HBG7 655 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 GLOD4Q9HC38 313 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 TXNRD2Q9NNW7 524 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 BTBD3Q9Y2F9 522 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 PLEKHM1Q9Y4G2 1056 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 LCTP09848 1927 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 ZNF236Q9UL36 1845 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 WDR19Q8NEZ3 1342 aa5.23□□□□□ -1.57
SMG1-206ENST00000562668 FNDC1Q4ZHG4 1894 aaPredicted RBP5.22□□□□□ -1.57
SMG1-206ENST00000562668 NID2Q14112 1375 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 PROB1E7EW31 1015 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 PPP6CO00743 305 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 WDR46O15213 610 aaKnown RBP5.22□□□□□ -1.57
SMG1-206ENST00000562668 PRC1O43663 620 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 TLR2O60603 784 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 PLA2G6O60733 806 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 FESP07332 822 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 PDHBP11177 359 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 TOP1P11387 765 aaKnown RBP5.22□□□□□ -1.57
SMG1-206ENST00000562668 HDCP19113 662 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 EVCP57679 992 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 CYP4F2P78329 520 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 SP2Q02086 613 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 TROAPQ12815 778 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms