RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 EIF4EBP2Q13542 120 aaPredicted RBP13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 AUHQ13825 339 aaKnown RBP13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 FUT11Q495W5 492 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 FSCBQ5H9T9 825 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 BRMS1LQ5PSV4 323 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 TTC39BQ5VTQ0 682 aaPredicted RBP13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 SFMBT2Q5VUG0 894 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 RNF219Q5W0B1 726 aaPredicted RBP13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 ARMCX6Q7L4S7 300 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 LPCAT2Q7L5N7 544 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 ADIPOR2Q86V24 386 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 TMEFF1Q8IYR6 380 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 CCAR2Q8N163 923 aaKnown RBP13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 FRMD1Q8N878 549 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 LOXL4Q96JB6 756 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 PCDHB18PQ96TA0 734 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 PRDM16Q9HAZ2 1276 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 SEMA4GQ9NTN9 838 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 KIAA1522Q9P206 1035 aaPredicted RBP13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 MYO6Q9UM54 1294 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 CYP8B1Q9UNU6 501 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 HS3ST4Q9Y661 456 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 SPAG17Q6Q759 2223 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 EP300Q09472 2414 aaPredicted RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 A0A1B0GVM2 712 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 TCAF2A6NFQ2 919 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 TMCO5BA8MYB1 307 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 LRP3O75074 770 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 NDUFS2O75306 463 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 ZNF217O75362 1048 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 ADCY5O95622 1261 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 KRT3P12035 628 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 MPLP40238 635 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 CSKP41240 450 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 CXCR3P49682 368 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 ATXN1P54253 815 aaKnown RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 RPL6Q02878 288 aaKnown RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 ZNF177Q13360 481 aaPredicted RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 NR1I3Q14994 352 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 PITRM1Q5JRX3 1037 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 OTUD1Q5VV17 481 aaPredicted RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 FBXL22Q6P050 247 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 LRRC31Q6UY01 552 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 FAM131BQ86XD5 332 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 DEFB119Q8N690 84 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 C12orf50Q8NA57 414 aaPredicted RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 OLIG1Q8TAK6 271 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 RXFP2Q8WXD0 754 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 BAP1Q92560 729 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 PRCCQ92733 491 aaPredicted RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 PGAP3Q96FM1 320 aaPredicted RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 SIPA1Q96FS4 1042 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 MRGPRX1Q96LB2 322 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 PRMT1Q99873 361 aaKnown RBP13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 ADAM33Q9BZ11 813 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 PARD6AQ9NPB6 346 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 TMEM51Q9NW97 253 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 TMEM59LQ9UK28 342 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 THADAQ6YHU6 1953 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 SDK1Q7Z5N4 2213 aa13.39□□□□□ -0.27
CTDSPL2-209ENST00000560620 AP5Z1O43299 807 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 SRGAP2O75044 1071 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 EPN2O95208 641 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 GJB6O95452 261 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 ASLP04424 464 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 TPM3P06753 285 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 DESP17661 470 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 NNMTP40261 264 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 LMNB2Q03252 620 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 C15orf59Q2T9L4 293 aaPredicted RBP13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 AASDHQ4L235 1098 aaPredicted RBP13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 PMS2CLQ68D20 193 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 TRNP1Q6NT89 227 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 DNAJC24Q6P3W2 148 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 LRSAM1Q6UWE0 723 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 SLC36A4Q6YBV0 504 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 CYP2U1Q7Z449 544 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 IRF2BP2Q7Z5L9 587 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 KIAA0907Q7Z7F0 614 aaPredicted RBP13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 TMPRSS6Q8IU80 811 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 JOSD2Q8TAC2 188 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 CPLX3Q8WVH0 158 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 IGSF8Q969P0 613 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 NT5C3BQ969T7 300 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 MKRN2Q9H000 416 aaKnown RBP13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 TMPRSS4Q9NRS4 437 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 ARHGEF38Q9NXL2 777 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 IFNKQ9P0W0 207 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 OTOGLQ3ZCN5 2332 aa13.38□□□□□ -0.27
CTDSPL2-209ENST00000560620 GPR179Q6PRD1 2367 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 ID4P47928 161 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 OXCT1P55809 520 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 ECT2LQ008S8 904 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 PTP4A2Q12974 167 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms