RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RNF34Q969K3 372 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 MS4A14Q96JA4 679 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 PRICKLE1Q96MT3 831 aaPredicted RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 NECTIN4Q96NY8 510 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 CSPG4P5Q96PW8 444 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 RNF157Q96PX1 679 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 FAM83CQ9BQN1 747 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 NACA2Q9H009 215 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 SIK2Q9H0K1 926 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 CARD9Q9H257 536 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 NDFIP2Q9NV92 336 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 SMARCAL1Q9NZC9 954 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 MYOFQ9NZM1 2061 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 PPARGC1AQ9UBK2 798 aaKnown RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 KIF26AQ9ULI4 1882 aaPredicted RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 TTC7AQ9ULT0 858 aaPredicted RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 MFHAS1Q9Y4C4 1052 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 LRRD1A4D1F6 860 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 OTOL1A6NHN0 477 aaPredicted RBP9.68□□□□□ -0.86
HERC1-206ENST00000559996 HEPACAM2A8MVW5 462 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 WASH4PA8MWX3 477 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 C2CD4DB7Z1M9 353 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 E9PAM4 449 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 KIF2AO00139 706 aaPredicted RBP9.68□□□□□ -0.86
HERC1-206ENST00000559996 KCNK3O14649 394 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 APOEP02649 317 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 KRT1P04264 644 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 HARS2P49590 506 aaKnown RBP9.68□□□□□ -0.86
HERC1-206ENST00000559996 COPS2P61201 443 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 FCHO2Q0JRZ9 810 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 SLC10A2Q12908 348 aaPredicted RBP9.68□□□□□ -0.86
HERC1-206ENST00000559996 PPP2R5EQ16537 467 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 GAB4Q2WGN9 574 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 ARL13BQ3SXY8 428 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 TFDP3Q5H9I0 405 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 EFHC2Q5JST6 749 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 SLC9A4Q6AI14 798 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 RHBDF2Q6PJF5 856 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 RFX8Q6ZV50 586 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 MFSD6LQ8IWD5 586 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 TP53INP2Q8IXH6 220 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 CPXM2Q8N436 756 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 UBL4BQ8N7F7 174 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 PLD5Q8N7P1 536 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 OR52K2Q8NGK3 314 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 CHFRQ96EP1 664 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 PBKQ96KB5 322 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 LMLNQ96KR4 655 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 ZNF670Q9BS34 389 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 DCLK3Q9C098 648 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 SLITRK6Q9H5Y7 841 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 NOL6Q9H6R4 1146 aaKnown RBP9.68□□□□□ -0.86
HERC1-206ENST00000559996 KIF9Q9HAQ2 790 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 ARHGEF4Q9NR80 690 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 MPP6Q9NZW5 540 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 CLEC4EQ9ULY5 219 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 EFR3BQ9Y2G0 817 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 SAR1BQ9Y6B6 198 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 ZFP37Q9Y6Q3 630 aaPredicted RBP9.68□□□□□ -0.86
HERC1-206ENST00000559996 UNC80Q8N2C7 3258 aa9.68□□□□□ -0.86
HERC1-206ENST00000559996 NUP205Q92621 2012 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 ARNTLO00327 626 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 CREB3O43889 395 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 ECI2O75521 394 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 IL9P15248 144 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 DESP17661 470 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 TCP1P17987 556 aaKnown RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 ERCC2P18074 760 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 GBP2P32456 591 aaPredicted RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 VCPP55072 806 aaKnown RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 RPS24P62847 133 aaKnown RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 HTR4Q13639 388 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 SKIV2LQ15477 1246 aaKnown RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 EML3Q32P44 896 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 PPP6R3Q5H9R7 873 aaPredicted RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 FYB2Q5VWT5 728 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 AFMIDQ63HM1 303 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 NCBP2-AS2Q69YL0 99 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 TRIM68Q6AZZ1 485 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 DDX42Q86XP3 938 aaKnown RBP eCLIP9.67□□□□□ -0.86
HERC1-206ENST00000559996 TMEM25Q86YD3 366 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 SLC13A5Q86YT5 568 aaPredicted RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 LGI2Q8N0V4 545 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 CFAP52Q8N1V2 620 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 MAFAQ8NHW3 353 aaPredicted RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 WFDC5Q8TCV5 224 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 ACTRT1Q8TDG2 376 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 BPIFB1Q8TDL5 484 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 OSCP1Q8WVF1 389 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 RSAD2Q8WXG1 361 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 ELSPBP1Q96BH3 223 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 PHF7Q9BWX1 381 aaPredicted RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 HEMGNQ9BXL5 484 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 OSBPL8Q9BZF1 889 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 ZFP14Q9HCL3 533 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 HPS4Q9NQG7 708 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 RCOR3Q9P2K3 495 aaPredicted RBP9.67□□□□□ -0.86
HERC1-206ENST00000559996 SLC12A6Q9UHW9 1150 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 FBXO10Q9UK96 956 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 VANGL2Q9ULK5 521 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms