RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 NOS2P35228 1153 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 GLUD2P49448 558 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 AFF1P51825 1210 aaKnown RBP10.31□□□□□ -0.76
LRRC28-216ENST00000559819 IFRD2Q12894 506 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-216ENST00000559819 THOC5Q13769 683 aaKnown RBP10.31□□□□□ -0.76
LRRC28-216ENST00000559819 DPYSQ14117 519 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 PCLAFQ15004 111 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 CCDC6Q16204 474 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 XKR4Q5GH76 650 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 TEDDM1Q5T9Z0 273 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 OLFML2BQ68BL8 750 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.31□□□□□ -0.76
LRRC28-216ENST00000559819 ZC3H15Q8WU90 426 aaKnown RBP10.31□□□□□ -0.76
LRRC28-216ENST00000559819 APBB2Q92870 758 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 FAM161BQ96MY7 647 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 APOL2Q9BQE5 337 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 CCDC106Q9BWC9 280 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 WWP1Q9H0M0 922 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 CRTAC1Q9NQ79 661 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 KRT82Q9NSB4 513 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 TMEM30AQ9NV96 361 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 FLRT1Q9NZU1 646 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 TMEM216Q9P0N5 145 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 KLHL8Q9P2G9 620 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-216ENST00000559819 LRRC42Q9Y546 428 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 YJEFN3A6XGL0 299 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 E7ENQ6 273 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 DCLK1O15075 740 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 TOMM70O94826 608 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 PSMG1O95456 288 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 ERCC2P18074 760 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 PNPLA4P41247 253 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 PSEN2P49810 448 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 PDE1BQ01064 536 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 PDK1Q15118 436 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 FAM91A1Q658Y4 838 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 MAVSQ7Z434 540 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 BNIPLQ7Z465 357 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 RSPH3Q86UC2 560 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 TLK2Q86UE8 772 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 C10orf107Q8IVU9 208 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.31□□□□□ -0.76
LRRC28-216ENST00000559819 NPWQ8N729 165 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 CDKL2Q92772 493 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 WNT8BQ93098 351 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 NT5C3BQ969T7 300 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 KCNK16Q96T55 309 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 RHOBTB2Q9BYZ6 727 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 PNPOQ9NVS9 261 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 THAP1Q9NVV9 213 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 ZFATQ9P243 1243 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 RCOR3Q9P2K3 495 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-216ENST00000559819 RPL26L1Q9UNX3 145 aaKnown RBP10.31□□□□□ -0.76
LRRC28-216ENST00000559819 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 RPS6KL1Q9Y6S9 549 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 WASF2Q9Y6W5 498 aa10.31□□□□□ -0.76
LRRC28-216ENST00000559819 CAPN9O14815 690 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 PDHA1P08559 390 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 PTPN3P26045 913 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 SLC1A6P48664 564 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 ADAM17P78536 824 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 TUBB3Q13509 450 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 PAFAH1B3Q15102 231 aaKnown RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 TWF2Q6IBS0 349 aaKnown RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 DPY19L2Q6NUT2 758 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 KYAT3Q6YP21 454 aaKnown RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 SH3TC2Q8TF17 1288 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 ZNF669Q96BR6 464 aaPredicted RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 SLC2A13Q96QE2 648 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 AGAP2Q99490 1192 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 PTPN18Q99952 460 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 EIF2B3Q9NR50 452 aaKnown RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 NMRK1Q9NWW6 199 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 TAGLN3Q9UI15 199 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 STAP1Q9ULZ2 295 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 GNEQ9Y223 722 aaKnown RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 MRPL42Q9Y6G3 142 aaKnown RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 MYBPHLA2RUH7 354 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 SPECC1L-ADORA2AF8WAN1 911 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 PPP1R12AO14974 1030 aaPredicted RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 XPOTO43592 962 aaKnown RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 GLRA3O75311 464 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 TBX10O75333 385 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 USP17L7P0C7H9 530 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 PAX7P23759 505 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 CNTFP26441 200 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 VWA5B1Q5TIE3 1220 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 HACE1Q8IYU2 909 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 PLD6Q8N2A8 252 aaKnown RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 TOP6BLQ8N6T0 577 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 RAB3IL1Q8TBN0 382 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 EDEM1Q92611 657 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 CERS2Q96G23 380 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 SMOQ99835 787 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 THTPAQ9BU02 230 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 OXCT2Q9BYC2 517 aaPredicted RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 CAB39LQ9H9S4 337 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 DDX43Q9NXZ2 648 aaKnown RBP10.3□□□□□ -0.76
LRRC28-216ENST00000559819 CPA4Q9UI42 421 aa10.3□□□□□ -0.76
LRRC28-216ENST00000559819 CCDC78A2IDD5 438 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms