RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ALDOAP04075 364 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 CCDC175P0C221 793 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 KCNA2P16389 499 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 GNAT2P19087 354 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 HNF1BP35680 557 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 CPOXP36551 454 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 GP5P40197 560 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 SLC15A1P46059 708 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 ANXA11P50995 505 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 CLCN2P51788 898 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 ZNF131P52739 623 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 CHN2P52757 468 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 MTAPQ13126 283 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 DOC2BQ14184 412 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 KCNJ12Q14500 433 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 ZNF792Q3KQV3 632 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 FAM90A2PQ658T7 463 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 HMBOX1Q6NT76 420 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 WDR93Q6P2C0 686 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 TMEM81Q6P7N7 255 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 SHQ1Q6PI26 577 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 SLC30A9Q6PML9 568 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 CRELD2Q6UXH1 353 aaPredicted RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 GPR149Q86SP6 731 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 IZUMO1Q8IYV9 350 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.04□□□□□ -1.76
TDP1-217ENST00000557782 TEX9Q8N6V9 391 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 SYT2Q8N9I0 419 aaPredicted RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 SPC24Q8NBT2 197 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 TMEM116Q8NCL8 245 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 OR6J1Q8NGC5 347 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 NEK9Q8TD19 979 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 SH3RF3Q8TEJ3 882 aaPredicted RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 MZB1Q8WU39 189 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 CNOT9Q92600 299 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 FAM162AQ96A26 154 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 SLC22A18Q96BI1 424 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 SAT2Q96F10 170 aaPredicted RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 SIPA1Q96FS4 1042 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 KLHL15Q96M94 604 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 ZNF512Q96ME7 567 aaPredicted RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 GCNAQ96QF7 691 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 SPAG5Q96R06 1193 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 MAP7D2Q96T17 732 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 NPAS1Q99742 590 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.04□□□□□ -1.76
TDP1-217ENST00000557782 THUMPD3Q9BV44 507 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 MRPL1Q9BYD6 325 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 DNAI2Q9GZS0 605 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 CTDSP1Q9GZU7 261 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 EPHX3Q9H6B9 360 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 COPS7BQ9H9Q2 264 aaPredicted RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 TLR8Q9NR97 1041 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 SELENONQ9NZV5 590 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 CTTNBP2NLQ9P2B4 639 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 SEC63Q9UGP8 760 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 SERTAD3Q9UJW9 196 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 TMCC3Q9ULS5 477 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 PPIEQ9UNP9 301 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 PA2G4Q9UQ80 394 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 MTMR6Q9Y217 621 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 ZDHHC9Q9Y397 364 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 hCG_1809904A0A1W2PP81 198 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 A0A1W2PPE2 198 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 A0A1W2PQM1 296 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 A0A1W2PR64 198 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 A8MVJ9 347 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 A8MZ25 164 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 KCNJ18B7U540 433 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 F5H697 171 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 INO80B-WBP1J3KQ70 363 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 PSMD9O00233 223 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 TRIAP1O43715 76 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 CCNT1O60563 726 aaKnown RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 ERN1O75460 977 aaKnown RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 IPO13O94829 963 aaKnown RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 MT-ND3P03897 115 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 RB1P06400 928 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 ABCB1P08183 1280 aaPredicted RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 CYP3A4P08684 503 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 ZNF8P17098 575 aaPredicted RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 BUD31P41223 144 aaPredicted RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 LIMS1P48059 325 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 LIG4P49917 911 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 ALDH3A2P51648 485 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 RPS6KA3P51812 740 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 HDAC4P56524 1084 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 TAS2R50P59544 299 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 ARHGAP8P85298 464 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 CDK18Q07002 472 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 E2F5Q15329 346 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 PKN2Q16513 984 aaKnown RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 GSTA3Q16772 222 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 AASDHQ4L235 1098 aaPredicted RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 DNAJC21Q5F1R6 531 aaKnown RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 SLC9A4Q6AI14 798 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 FOXR2Q6PJQ5 311 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 FAM111BQ6SJ93 734 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 MAMDC4Q6UXC1 1216 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms