RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 APBA1Q02410 837 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 DRAP1Q14919 205 aaPredicted RBP13.05□□□□□ -0.32
SNX6-207ENST00000556303 ZC3H12AQ5D1E8 599 aaKnown RBP13.05□□□□□ -0.32
SNX6-207ENST00000556303 OLFML1Q6UWY5 402 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 ARMCX6Q7L4S7 300 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 SLC47A2Q86VL8 602 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 ADAM32Q8TC27 787 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 PRICKLE1Q96MT3 831 aaPredicted RBP13.05□□□□□ -0.32
SNX6-207ENST00000556303 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
SNX6-207ENST00000556303 STK33Q9BYT3 514 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 SYNCQ9H7C4 482 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 METTL12A8MUP2 240 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 F5H5T6 163 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 H0Y626 953 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 ARHGAP33O14559 1287 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 LSM8O95777 96 aaKnown RBP13.04□□□□□ -0.32
SNX6-207ENST00000556303 CYP11B1P15538 503 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 ENGP17813 658 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 GABRB2P47870 512 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
SNX6-207ENST00000556303 RPS24P62847 133 aaKnown RBP13.04□□□□□ -0.32
SNX6-207ENST00000556303 SHC2P98077 582 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 SULT2A1Q06520 285 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 KCNMA1Q12791 1236 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 SLC14A1Q13336 389 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 OR6B2Q6IFH4 312 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 ARCQ7LC44 396 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 CHSY1Q86X52 802 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 ZNF677Q86XU0 584 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 RGL4Q8IZJ4 473 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 DEFB106AQ8N104 65 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 MSANTD4Q8NCY6 345 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 WFDC5Q8TCV5 224 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 CYB5D2Q8WUJ1 264 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 PGAP3Q96FM1 320 aaPredicted RBP13.04□□□□□ -0.32
SNX6-207ENST00000556303 PRMT1Q99873 361 aaKnown RBP13.04□□□□□ -0.32
SNX6-207ENST00000556303 SLC6A17Q9H1V8 727 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 FAM204AQ9H8W3 233 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 PRSS16Q9NQE7 514 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 SAMSN1Q9NSI8 373 aaKnown RBP13.04□□□□□ -0.32
SNX6-207ENST00000556303 DDIT4Q9NX09 232 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 STIM2Q9P246 746 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 CABIN1Q9Y6J0 2220 aa13.04□□□□□ -0.32
SNX6-207ENST00000556303 A0A1B0GTW7 788 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 TARSL2A2RTX5 802 aaKnown RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 PES1O00541 588 aaKnown RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 RNASEH1O60930 286 aaKnown RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 DAB1O75553 588 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 MOCS2O96007 188 aaPredicted RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 F9P00740 461 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 DNTTP04053 509 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 CFIP05156 583 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 HLA-EP13747 358 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 CSKP41240 450 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 MATKP42679 507 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 PLK1P53350 603 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 RAPGEF1Q13905 1077 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 HNRNPDQ14103 355 aaKnown RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 TAF5Q15542 800 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 HNRNPA1L2Q32P51 320 aaKnown RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 C5orf22Q49AR2 442 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 PTPN20Q4JDL3 420 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 BRMS1LQ5PSV4 323 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 N4BP2L1Q5TBK1 243 aaPredicted RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 CDKAL1Q5VV42 579 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 RAP1GAP2Q684P5 730 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 USP30Q70CQ3 517 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 PASD1Q8IV76 773 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 LGI2Q8N0V4 545 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 HDDC3Q8N4P3 179 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 RNF34Q969K3 372 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 NT5C3BQ969T7 300 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 C18orf8Q96DM3 657 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 MYO19Q96H55 970 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 GPR174Q9BXC1 333 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 PDCL3Q9H2J4 239 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 SLC32A1Q9H598 525 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 SGK2Q9HBY8 427 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 ANO10Q9NW15 660 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 AJAP1Q9UKB5 411 aaPredicted RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 INTS6Q9UL03 887 aaKnown RBP13.03□□□□□ -0.32
SNX6-207ENST00000556303 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 FHOD1Q9Y613 1164 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 CACNA1BQ00975 2339 aa13.03□□□□□ -0.32
SNX6-207ENST00000556303 A0A1B0GVM2 712 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 TCAF2A6NFQ2 919 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 MEI4A8MW99 385 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 OPHN1O60890 802 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 ERBB2P04626 1255 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 PMLP29590 882 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 NNMTP40261 264 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 NOVA1P51513 510 aaKnown RBP13.02□□□□□ -0.33
SNX6-207ENST00000556303 RPS14P62263 151 aaKnown RBP13.02□□□□□ -0.33
SNX6-207ENST00000556303 ECT2LQ008S8 904 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 PLEKHG6Q3KR16 790 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms