RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	EFHC2	Q5JST6	749 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	HTR3D	Q70Z44	454 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	MIB1	Q86YT6	1006 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	RASGEF1C	Q8N431	466 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	CCDC185	Q8N715	623 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	TSC1	Q92574	1164 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	SMARCD2	Q92925	531 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	RNF34	Q969K3	372 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	RBM41	Q96IZ5	413 aa	Known RBP	11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	BTN2A3P	Q96KV6	586 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	ASB16	Q96NS5	453 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	SLC22A12	Q96S37	553 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	OSBPL9	Q96SU4	736 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	SNRNP25	Q9BV90	132 aa	Known RBP	11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	TKTL2	Q9H0I9	626 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	RETREG1	Q9H6L5	497 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	TRPV4	Q9HBA0	871 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	ANLN	Q9NQW6	1124 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	RALY	Q9UKM9	306 aa	Known RBP	11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	ZNF510	Q9Y2H8	683 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	SPTBN2	O15020	2390 aa		11.7	□□□□□ -0.54
RAD51B-222	ENST00000555907	C3orf70	A6NLC5	250 aa	Predicted RBP	11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907		I6L893	689 aa	Predicted RBP	11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	KCNK3	O14649	394 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	MSI1	O43347	362 aa	Known RBP	11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	GREM1	O60565	184 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	CKM	P06732	381 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	PYGM	P11217	842 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	MBL2	P11226	248 aa	Predicted RBP	11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	IL4R	P24394	825 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	CETN2	P41208	172 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	MARCKSL1	P49006	195 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	HARS2	P49590	506 aa	Known RBP	11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	ZXDB	P98169	803 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	PRKCQ	Q04759	706 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	SEMA3B	Q13214	749 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	GRM2	Q14416	872 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	PPP2R5E	Q16537	467 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	C5orf22	Q49AR2	442 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	KCNT1	Q5JUK3	1230 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	ARTN	Q5T4W7	220 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	KCTD6	Q8NC69	237 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	RAPGEF5	Q92565	580 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	FAF2	Q96CS3	445 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	PRMT1	Q99873	361 aa	Known RBP	11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	SLITRK6	Q9H5Y7	841 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	ZWILCH	Q9H900	591 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	TRPC7	Q9HCX4	862 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	GKN1	Q9NS71	199 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	TDP1	Q9NUW8	608 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	OBP2A	Q9NY56	170 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	AP4E1	Q9UPM8	1137 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	CPQ	Q9Y646	472 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	OBSL1	O75147	1896 aa		11.69	□□□□□ -0.54
RAD51B-222	ENST00000555907	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	E2F8	A0AVK6	867 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	DRGX	A6NNA5	263 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	ACSL4	O60488	711 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	PAGE1	O75459	146 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	KLKB1	P03952	638 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	AVPR1A	P37288	418 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	VIPR2	P41587	438 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	CDKN2B	P42772	138 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	SLC11A2	P49281	568 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	SPEM2	Q0P670	501 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	CA9	Q16790	459 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	TFDP3	Q5H9I0	405 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	STXBP5	Q5T5C0	1151 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	DCAF12L1	Q5VU92	463 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	VIT	Q6UXI7	678 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907		Q6ZNB5	142 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	TPRG1	Q6ZUI0	275 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	CREG2	Q8IUH2	290 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	FAM217A	Q8IXS0	508 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	ACTRT1	Q8TDG2	376 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	USP13	Q92995	863 aa	Predicted RBP	11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	E2F7	Q96AV8	911 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	KCTD15	Q96SI1	283 aa	Predicted RBP	11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	DDX50	Q9BQ39	737 aa	Known RBP	11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	ZNF670	Q9BS34	389 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	TRMT61B	Q9BVS5	477 aa	Known RBP	11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	DHX35	Q9H5Z1	703 aa	Known RBP	11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	BRD9	Q9H8M2	597 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	KIF9	Q9HAQ2	790 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	PCDH18	Q9HCL0	1135 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	PARD6A	Q9NPB6	346 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	LTB4R2	Q9NPC1	389 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	COX16	Q9P0S2	106 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	OR12D3	Q9UGF7	316 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	CDC23	Q9UJX2	597 aa		11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.68	□□□□□ -0.54
RAD51B-222	ENST00000555907	F5	P12259	2224 aa		11.67	□□□□□ -0.54
RAD51B-222	ENST00000555907	GPR179	Q6PRD1	2367 aa		11.67	□□□□□ -0.54
RAD51B-222	ENST00000555907	IGLV3-10	A0A075B6K4	115 aa		11.67	□□□□□ -0.54
RAD51B-222	ENST00000555907	LEFTY2	O00292	366 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms