RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	FZD4	Q9ULV1	537 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506		A0A087X0M5	115 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506		A0A1B0GX30	115 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	LINC00473	A8K010	186 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	GRM8	O00222	908 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	ZNF213	O14771	459 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	DHX16	O60231	1041 aa	Known RBP	4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	PDE8B	O95263	885 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	ESRRB	O95718	433 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	CENPB	P07199	599 aa	Predicted RBP	4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	LDHC	P07864	332 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	ABCD3	P28288	659 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	SLC8A1	P32418	973 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	AVPR1B	P47901	424 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	CCT4	P50991	539 aa	Known RBP	4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	CDK18	Q07002	472 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	AARS2	Q5JTZ9	985 aa	Known RBP	4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	TMEM63B	Q5T3F8	832 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	TMEM88	Q6PEY1	159 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	KYAT3	Q6YP21	454 aa	Known RBP	4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	ARMC8	Q8IUR7	673 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	LAS2	Q8IYD9	372 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	SRFBP1	Q8NEF9	429 aa	Known RBP	4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	ACTRT2	Q8TDY3	377 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	TBC1D22A	Q8WUA7	517 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	UCMA	Q8WVF2	138 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	CAVIN3	Q969G5	261 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	MASTL	Q96GX5	879 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	HTATIP2	Q9BUP3	242 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	IL21R	Q9HBE5	538 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	LRIT1	Q9P2V4	623 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	AASS	Q9UDR5	926 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	ENTPD2	Q9Y5L3	495 aa		4.83	□□□□□ -1.64
KTN1-222	ENST00000555506	SALL3	Q9BXA9	1300 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	ORC4	O43929	436 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	TMEM63A	O94886	807 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	RTN3	O95197	1032 aa	Predicted RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	KAT7	O95251	611 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	WEE2	P0C1S8	567 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	APEH	P13798	732 aa	Known RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	ADRA1B	P35368	520 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	PLA2G5	P39877	138 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	MPL	P40238	635 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	AGTR2	P50052	363 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	CCT8	P50990	548 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	COPB1	P53618	953 aa	Known RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	WDR5	P61964	334 aa	Known RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	NFIL3	Q16649	462 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	ERCC6L	Q2NKX8	1250 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	PCID2	Q5JVF3	399 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	GPATCH4	Q5T3I0	446 aa	Known RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	CCDC30	Q5VVM6	783 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	OLFML1	Q6UWY5	402 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	GALNT4	Q8N4A0	578 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	LSM14A	Q8ND56	463 aa	Known RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	CENPI	Q92674	756 aa	Predicted RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	KAZALD1	Q96I82	304 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	MMS19	Q96T76	1030 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	FUZ	Q9BT04	418 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	PHF7	Q9BWX1	381 aa	Predicted RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	TAOK3	Q9H2K8	898 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	TBC1D22B	Q9NU19	505 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	GAR1	Q9NY12	217 aa	Known RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	SEMA5B	Q9P283	1151 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	CNOT7	Q9UIV1	285 aa	Known RBP	4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	CD207	Q9UJ71	328 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	SUFU	Q9UMX1	484 aa		4.82	□□□□□ -1.64
KTN1-222	ENST00000555506	TTC34	A8MYJ7	566 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	SPTLC2	O15270	562 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	SLC3A2	P08195	630 aa	Known RBP	4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	ELFN1	P0C7U0	828 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	BMP5	P22003	454 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	RPP30	P78346	268 aa	Known RBP	4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	CAMK1	Q14012	370 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	RUNDC3A	Q59EK9	446 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	SLC39A5	Q6ZMH5	540 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	ZNF804A	Q7Z570	1209 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	TDRD7	Q8NHU6	1098 aa	Known RBP	4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	MAFA	Q8NHW3	353 aa	Predicted RBP	4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	TBC1D5	Q92609	795 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	ZG16B	Q96DA0	208 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	APOPT1	Q96IL0	206 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	ADGRE3	Q9BY15	652 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	CIPC	Q9C0C6	399 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	PRDM13	Q9H4Q3	707 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	MTMR4	Q9NYA4	1195 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	TFCP2L1	Q9NZI6	479 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	ST3GAL5	Q9UNP4	418 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	B3GNT3	Q9Y2A9	372 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	SPATA31A1	Q5TZJ5	1347 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506		A0A1W2PPH5	198 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	SH2D7	A6NKC9	451 aa	Predicted RBP	4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	PRSS47	A8MTI9	375 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	FYB1	O15117	783 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	TULP3	O75386	442 aa		4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	RNASEH2A	O75792	299 aa	Known RBP	4.81	□□□□□ -1.64
KTN1-222	ENST00000555506	METTL18	O95568	372 aa		4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms