RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ZNF449Q6P9G9 518 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 C1orf228Q6PIY5 440 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 RFX8Q6ZV50 586 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 B4GALNT4Q76KP1 1039 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ZC3H18Q86VM9 953 aaKnown RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 MON1AQ86VX9 555 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 FAM131BQ86XD5 332 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 NPAS4Q8IUM7 802 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 UNC45BQ8IWX7 931 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 PALM2Q8IXS6 379 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ZBED8Q8IZ13 594 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 CCDC185Q8N715 623 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SLC7A14Q8TBB6 771 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SPPL2BQ8TCT7 592 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 HTR3CQ8WXA8 447 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 LINC01599Q8WXQ3 324 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SPATA13Q96N96 652 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 PAAF1Q9BRP4 392 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 NAT9Q9BTE0 207 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SMOC2Q9H3U7 446 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 RETREG1Q9H6L5 497 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 WDCPQ9H6R7 721 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SSU72Q9NP77 194 aaKnown RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ARHGEF4Q9NR80 690 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 DDIT4Q9NX09 232 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 DTLQ9NZJ0 730 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SCHIP1Q9P0W5 487 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SAE1Q9UBE0 346 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 STK39Q9UEW8 545 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 XPO7Q9UIA9 1087 aaKnown RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ADAM28Q9UKQ2 775 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 TRHDEQ9UKU6 1024 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 NAALADL1Q9UQQ1 740 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 TRIM17Q9Y577 477 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 PCDHB5Q9Y5E4 795 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 HEY1Q9Y5J3 304 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 TIMM13Q9Y5L4 95 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 FAM92AA1XBS5 289 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 GMNCA6NCL1 334 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 DCDC2CA8MYV0 355 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 TNFRSF10BO14763 440 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 NRP1O14786 923 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 DCLK1O15075 740 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 FGF10O15520 208 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 FAM155BO75949 473 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 DDHD2O94830 711 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 RTN3O95197 1032 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 FAM107AO95990 144 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 USP17L7P0C7H9 530 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 ETS1P14921 441 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 GOT1P17174 413 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 FGFR3P22607 806 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 BDNFP23560 247 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 RBL1P28749 1068 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 CCR1P32246 355 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 HPDP32754 393 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 STX2P32856 288 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 GRIK1P39086 918 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 OR1G1P47890 313 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 NDUFV1P49821 464 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 KPNA1P52294 538 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 GEMIN4P57678 1058 aaKnown RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 TPI1P60174 286 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 YWHAGP61981 247 aaKnown RBP eCLIP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 BASP1P80723 227 aaKnown RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 NME3Q13232 169 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 EIF4EBP2Q13542 120 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 PARP6Q2NL67 630 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 LGSNQ5TDP6 509 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 SYPL2Q5VXT5 272 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 BTBD8Q5XKL5 378 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 KCNT2Q6UVM3 1135 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 ARHGEF18Q6ZSZ5 1173 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 MICALCLQ6ZW33 695 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 ANKS3Q6ZW76 656 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 BHLHA9Q7RTU4 235 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 SIX5Q8N196 739 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 NUP93Q8N1F7 819 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 LRRC43Q8N309 656 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 ZNF276Q8N554 614 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 GLIS1Q8NBF1 620 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 OR10T2Q8NGX3 314 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 BCAS4Q8TDM0 211 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 ARHGEF2Q92974 986 aaKnown RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 ALKBH8Q96BT7 664 aaKnown RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 SGSM3Q96HU1 749 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 SPATA17Q96L03 361 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 C1orf74Q96LT6 269 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 C9orf72Q96LT7 481 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 SERPINB11Q96P15 392 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 CDK5RAP1Q96SZ6 601 aaKnown RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 KCNK16Q96T55 309 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 CYTH2Q99418 400 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 ACSS3Q9H6R3 686 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 LRRC4CQ9HCJ2 640 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 WDR6Q9NNW5 1121 aaKnown RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 PRDM10Q9NQV6 1147 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 OLA1Q9NTK5 396 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms