RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 HCRTO43612 131 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 KLHL41O60662 606 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 TFAP2AP05549 437 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 ITGA2BP08514 1039 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 VDRP11473 427 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 ALOX15P16050 662 aaPredicted RBP5.57□□□□□ -1.52
LIMA1-212ENST00000552491 CNTFP26441 200 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 MGAT1P26572 445 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 SERPINB6P35237 376 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 ABCG1P45844 678 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 PGGT1BP53609 377 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 OAZ1P54368 228 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 MTTPP55157 894 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 FOLH1Q04609 750 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 TBL3Q12788 808 aaKnown RBP5.57□□□□□ -1.52
LIMA1-212ENST00000552491 SNAPC2Q13487 334 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 SEMA5AQ13591 1074 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 PDK2Q15119 407 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 HSDL1Q3SXM5 330 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 MMEL1Q495T6 779 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 ANKRD20A4Q4UJ75 823 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 BOLA3Q53S33 107 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 C6orf132Q5T0Z8 1188 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 PPP1R26Q5T8A7 1209 aaPredicted RBP5.57□□□□□ -1.52
LIMA1-212ENST00000552491 IER5Q5VY09 327 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 CASC4Q6P4E1 433 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 PAOXQ6QHF9 649 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 C4orf22Q6V702 233 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 CYS1Q717R9 158 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 SAMD7Q7Z3H4 446 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 ARPINQ7Z6K5 226 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 ST13P4Q8IZP2 240 aaPredicted RBP5.57□□□□□ -1.52
LIMA1-212ENST00000552491 PYROXD2Q8N2H3 581 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 METTL25Q8N6Q8 603 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 ZNF781Q8N8C0 355 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 DRAXINQ8NBI3 349 aaPredicted RBP5.57□□□□□ -1.52
LIMA1-212ENST00000552491 PGBD4Q96DM1 585 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 CLMNQ96JQ2 1002 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 OR52B2Q96RD2 323 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 PPP1R16BQ96T49 567 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 LGMNQ99538 433 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 RPF1Q9H9Y2 349 aaKnown RBP5.57□□□□□ -1.52
LIMA1-212ENST00000552491 DNAJC28Q9NX36 388 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 COPG2Q9UBF2 871 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 HESX1Q9UBX0 185 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 COMMD3-BMI1R4GMX3 469 aa5.57□□□□□ -1.52
LIMA1-212ENST00000552491 MCM3APO60318 1980 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 VILLO15195 856 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 DNAJA2O60884 412 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 GLRA3O75311 464 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 FBXO21O94952 628 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 STAG3L1P0CL83 205 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 ERVK-10P10266 1014 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 MYL4P12829 197 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 COX4I1P13073 169 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 MLH1P40692 756 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 CCR10P46092 362 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 HARS2P49590 506 aaKnown RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 CLCN3P51790 818 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 CHN2P52757 468 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 SESN2P58004 480 aaPredicted RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 ABCE1P61221 599 aaKnown RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 RPL26P61254 145 aaKnown RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 MBTD1Q05BQ5 628 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 KLF10Q13118 480 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 DLG2Q15700 870 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 GOLGA7BQ2TAP0 167 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 SLC10A6Q3KNW5 377 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 GRAMD1BQ3KR37 738 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 PPM1LQ5SGD2 360 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 OGFRL1Q5TC84 451 aaPredicted RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 MAP3K21Q5TCX8 1036 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 BSPRYQ5W0U4 402 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 LCLAT1Q6UWP7 414 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 CATSPERGQ6ZRH7 1159 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 SPATA24Q86W54 205 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 ZBTB8OSQ8IWT0 167 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 TP53INP2Q8IXH6 220 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 FBXW8Q8N3Y1 598 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 PIP4K2CQ8TBX8 421 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 AGR3Q8TD06 166 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 JADE3Q92613 823 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 DTNBP1Q96EV8 351 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 ATXN7L3BQ96GX2 97 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 DNAJC1Q96KC8 554 aaKnown RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 FCRL3Q96P31 734 aaPredicted RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 LENG8Q96PV6 779 aaPredicted RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 KCTD15Q96SI1 283 aaPredicted RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 ZNF670Q9BS34 389 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 MIS12Q9H081 205 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 FAM96AQ9H5X1 160 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 DHX35Q9H5Z1 703 aaKnown RBP5.56□□□□□ -1.52
LIMA1-212ENST00000552491 COG4Q9H9E3 785 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 DTLQ9NZJ0 730 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 HSFX1Q9UBD0 423 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 HES2Q9Y543 173 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 A0A1B0GTW7 788 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 DPYSL4O14531 572 aa5.56□□□□□ -1.52
LIMA1-212ENST00000552491 MDM4O15151 490 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms