RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 IMPG2Q9BZV3 1241 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF700Q9H0M5 742 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 TOMM22Q9NS69 142 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 MRPS23Q9Y3D9 190 aaKnown RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 BAZ2BQ9UIF8 2168 aaKnown RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 MTMR11A4FU01 709 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 PRPF4O43172 522 aaKnown RBP eCLIP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 VEGFDO43915 354 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 VARSP26640 1264 aaKnown RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 GSTM5P46439 218 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 DMPKQ09013 629 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ADAM15Q13444 863 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 IKBKEQ14164 716 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 LEXMQ3ZCV2 418 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 PTPN20Q4JDL3 420 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 TMEM63BQ5T3F8 832 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 SCD5Q86SK9 330 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ZCCHC9Q8N567 271 aaKnown RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF461Q8TAF7 563 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 SPAG5Q96R06 1193 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 SPSB2Q99619 263 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 GABRG3Q99928 467 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 DDX50Q9BQ39 737 aaKnown RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 POPDC2Q9HBU9 364 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 MAGEE1Q9HCI5 957 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 MIOSQ9NXC5 875 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ASIC5Q9NY37 505 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 SALL4Q9UJQ4 1053 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 HS3ST2Q9Y278 367 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ILVBLA1L0T0 632 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 LIASO43766 372 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 EXOC3O60645 756 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 CISD3P0C7P0 127 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 KRT9P35527 623 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 TNFSF9P41273 254 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 GALCP54803 685 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 FPGSQ05932 587 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 CAMK1Q14012 370 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ANO4Q32M45 955 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF699Q32M78 642 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 GRAMD1BQ3KR37 738 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ALKBH5Q6P6C2 394 aaKnown RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ELMSAN1Q6PJG2 1045 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 SEPT14Q6ZU15 432 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ITIH5Q86UX2 942 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 HERC6Q8IVU3 1022 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 NRSN1Q8IZ57 195 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 IQCKQ8N0W5 287 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 TTC16Q8NEE8 873 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 HMGCLL1Q8TB92 370 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 POMGNT1Q8WZA1 660 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF707Q96C28 371 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 MRPL38Q96DV4 380 aaKnown RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 TTC25Q96NG3 672 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 SERPINB11Q96P15 392 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 PITHD1Q9GZP4 211 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ANKZF1Q9H8Y5 726 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 GPRC5CQ9NQ84 441 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 STARD7Q9NQZ5 370 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 TMPRSS4Q9NRS4 437 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 MRGBPQ9NV56 204 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 PCDHB3Q9Y5E6 796 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 A0A1W2PQ72 361 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 GSTA1P08263 222 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 CSH1P0DML2 217 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 CSH2P0DML3 217 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 RPS9P46781 194 aaKnown RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 NIPAL4Q0D2K0 466 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 EIF4HQ15056 248 aaKnown RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 TMEM95Q3KNT9 176 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 USP41Q3LFD5 358 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 PABPC1LQ4VXU2 614 aaKnown RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF280DQ6N043 979 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ERAP2Q6P179 960 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 NEK5Q6P3R8 708 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 TLDC1Q6P9B6 456 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 IGF2-ASQ6U949 168 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ZDHHC24Q6UX98 284 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 KIAA0408Q6ZU52 694 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ARHGAP12Q8IWW6 846 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 CARNMT1Q8N4J0 409 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 PQLC3Q8N755 202 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ANKS4BQ8N8V4 417 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 MNS1Q8NEH6 495 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF398Q8TD17 642 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 DEPDC1BQ8WUY9 529 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 WDR34Q96EX3 536 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 KLHL5Q96PQ7 755 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 OSBPL9Q96SU4 736 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 MAGEH1Q9H213 219 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 STN1Q9H668 368 aaKnown RBP5.06□□□□□ -1.6
SCAF11-212ENST00000549162 PYCARDQ9ULZ3 195 aa5.06□□□□□ -1.6
SCAF11-212ENST00000549162 hCG_1642624A0A1W2PR95 340 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 C2orf71A6NGG8 1288 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 HNRNPDLO14979 420 aaKnown RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 PF4P02776 101 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 COL6A2P12110 1019 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 MYCLP12524 364 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 GIPRP48546 466 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 IL10RBQ08334 325 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms