RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 UNC5AQ6ZN44 842 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 TMEM173Q86WV6 379 aaPredicted RBP21.51■■□□□ 1.03
RITA1-201ENST00000548278 LRRC34Q8IZ02 419 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 CKAP2Q8WWK9 683 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 SMC6Q96SB8 1091 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 SIK2Q9H0K1 926 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 SMG5Q9UPR3 1016 aaKnown RBP21.51■■□□□ 1.03
RITA1-201ENST00000548278 NT5C1B-RDH14C9J2C7 533 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 SRGAP2BP0DMP2 458 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 HOXC13P31276 330 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 PBX3P40426 434 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 MANEALQ5VSG8 457 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 C4orf33Q8N1A6 199 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 DENND1AQ8TEH3 1009 aa21.51■■□□□ 1.03
RITA1-201ENST00000548278 KCNU1A8MYU2 1149 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 PRKCHP24723 683 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 FAAP100Q0VG06 881 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 ELAVL2Q12926 359 aaKnown RBP21.5■■□□□ 1.03
RITA1-201ENST00000548278 RTP2Q5QGT7 225 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 MSANTD2Q6P1R3 559 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 LRRC8BQ6P9F7 803 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 PID1Q7Z2X4 250 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 SPATS2Q86XZ4 545 aaKnown RBP21.5■■□□□ 1.03
RITA1-201ENST00000548278 DEPDC1BQ8WUY9 529 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 SGSM3Q96HU1 749 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 SERPINB11Q96P15 392 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 GMIPQ9P107 970 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 KLHL8Q9P2G9 620 aaPredicted RBP21.5■■□□□ 1.03
RITA1-201ENST00000548278 GGA2Q9UJY4 613 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 MAD1L1Q9Y6D9 718 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 SHROOM3Q8TF72 1996 aa21.5■■□□□ 1.03
RITA1-201ENST00000548278 FAM92AA1XBS5 289 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 MTSS1O43312 755 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 TYROBPO43914 113 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 VNN2O95498 520 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 APOEP02649 317 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 HTR7P34969 479 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 ARPP19P56211 112 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 WDR4P57081 412 aaKnown RBP21.49■■□□□ 1.03
RITA1-201ENST00000548278 GPR17Q13304 367 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 RWDD4Q6NW29 188 aaKnown RBP21.49■■□□□ 1.03
RITA1-201ENST00000548278 SLC39A5Q6ZMH5 540 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 ARHGAP18Q8N392 663 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 GDAP1Q8TB36 358 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 BCL7CQ8WUZ0 217 aaPredicted RBP21.49■■□□□ 1.03
RITA1-201ENST00000548278 DPF3Q92784 378 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 SEC16BQ96JE7 1060 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 FCRL2Q96LA5 508 aaPredicted RBP21.49■■□□□ 1.03
RITA1-201ENST00000548278 GORASP1Q9BQQ3 440 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 SSU72Q9NP77 194 aaKnown RBP21.49■■□□□ 1.03
RITA1-201ENST00000548278 MTMR11A4FU01 709 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 SOAT2O75908 522 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 MNX1P50219 401 aaPredicted RBP21.49■■□□□ 1.03
RITA1-201ENST00000548278 TAS1R1Q7RTX1 841 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 TAX1BP1Q86VP1 789 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 GPR152Q8TDT2 470 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 TRIM56Q9BRZ2 755 aaKnown RBP21.49■■□□□ 1.03
RITA1-201ENST00000548278 PPP1R12CQ9BZL4 782 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 CRISPLD1Q9H336 500 aa21.49■■□□□ 1.03
RITA1-201ENST00000548278 MICAL3Q7RTP6 2002 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 PARNO95453 639 aaKnown RBP21.48■■□□□ 1.03
RITA1-201ENST00000548278 VIMP08670 466 aaKnown RBP21.48■■□□□ 1.03
RITA1-201ENST00000548278 CPB1P15086 417 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 KRT4P19013 534 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 GKAP1Q5VSY0 366 aaPredicted RBP21.48■■□□□ 1.03
RITA1-201ENST00000548278 LRRC43Q8N309 656 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 GSDMBQ8TAX9 411 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 CELF6Q96J87 481 aaKnown RBP21.48■■□□□ 1.03
RITA1-201ENST00000548278 SLC27A5Q9Y2P5 690 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 PCDHA11Q9Y5I1 949 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 GREB1Q4ZG55 1949 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 CXorf49A8MYA2 514 aaPredicted RBP21.48■■□□□ 1.03
RITA1-201ENST00000548278 ASMTLO95671 621 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 INHBAP08476 426 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 CD68P34810 354 aaPredicted RBP21.48■■□□□ 1.03
RITA1-201ENST00000548278 ZBTB17Q13105 803 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 RNF19BQ6ZMZ0 732 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 SRLQ86TD4 932 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 ZSCAN18Q8TBC5 510 aaPredicted RBP21.48■■□□□ 1.03
RITA1-201ENST00000548278 SPPL2BQ8TCT7 592 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 SLC39A13Q96H72 371 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 TTPALQ9BTX7 342 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 SMYD2Q9NRG4 433 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 TMEM51Q9NW97 253 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 TLR6Q9Y2C9 796 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 RRP15Q9Y3B9 282 aaKnown RBP21.48■■□□□ 1.03
RITA1-201ENST00000548278 IKBKGQ9Y6K9 419 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 FAM169AQ9Y6X4 670 aa21.48■■□□□ 1.03
RITA1-201ENST00000548278 IQANK1A0A1B0GTG1 560 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 SDR42E2A6NKP2 422 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 TCP11X1B4DZS4 312 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 H7C4K7 107 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 FGF10O15520 208 aaPredicted RBP21.47■■□□□ 1.03
RITA1-201ENST00000548278 ZBTB24O43167 697 aaPredicted RBP21.47■■□□□ 1.03
RITA1-201ENST00000548278 YWHAQP27348 245 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 RPA3P35244 121 aaPredicted RBP21.47■■□□□ 1.03
RITA1-201ENST00000548278 NRG1Q02297 640 aaPredicted RBP21.47■■□□□ 1.03
RITA1-201ENST00000548278 TLE2Q04725 743 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 TEX44Q53QW1 395 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 STEAP4Q687X5 459 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms