RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 ZNF670Q9BS34 389 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 KLF16Q9BXK1 252 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 KLC2Q9H0B6 622 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TKTL2Q9H0I9 626 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PLEKHA4Q9H4M7 779 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 ARHGEF4Q9NR80 690 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 MARCH2Q9P0N8 246 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 DNMT3BQ9UBC3 853 aaKnown RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 SAE1Q9UBE0 346 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 ZNF212Q9UDV6 495 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 ATP8A1Q9Y2Q0 1164 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 SNX24Q9Y343 169 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 NEU2Q9Y3R4 380 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 DOCK4Q8N1I0 1966 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 DCLK1O15075 740 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 LINC01565O15544 149 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PAGE1O75459 146 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 LRIG2O94898 1065 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TJP3O95049 919 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 AGTP01019 485 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 GOT1P17174 413 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 GJA1P17302 382 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 CA8P35219 290 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 AIF1P55008 147 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 RING1Q06587 406 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 SLC10A2Q12908 348 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PTK6Q13882 451 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 ADGRE1Q14246 886 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 COL19A1Q14993 1142 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 VEPH1Q14D04 833 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PDK2Q15119 407 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 OASLQ15646 514 aaKnown RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 KRT71Q3SY84 523 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 FAM133BQ5BKY9 247 aaKnown RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 ANKRD20A8PQ5CZ79 823 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 BRMS1LQ5PSV4 323 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 C10orf120Q5SQS8 335 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 HECTD3Q5T447 861 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TXNDC8Q6A555 127 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TMEM184AQ6ZMB5 413 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TAOK1Q7L7X3 1001 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 C14orf80Q86SX3 495 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 SRLQ86TD4 932 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 MIB1Q86YT6 1006 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 RELL1Q8IUW5 271 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 NPWQ8N729 165 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 C12orf76Q8N812 135 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 SLC35B2Q8TB61 432 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 FBXO25Q8TCJ0 367 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 MICAL1Q8TDZ2 1067 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 RNF139Q8WU17 664 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 SNF8Q96H20 258 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 RNF157Q96PX1 679 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 CYP2S1Q96SQ9 504 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 NCAPGQ9BPX3 1015 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TRIM51Q9BSJ1 452 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PRKD2Q9BZL6 878 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TRIM31Q9BZY9 425 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 DCLK3Q9C098 648 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 OSBPL2Q9H1P3 480 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 NEUROG2Q9H2A3 272 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 DHX35Q9H5Z1 703 aaKnown RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 GRHL1Q9NZI5 618 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 RCOR3Q9P2K3 495 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 RSPH14Q9UHP6 348 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 CDH22Q9UJ99 828 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 COLQQ9Y215 455 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 DRG1Q9Y295 367 aaKnown RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 HS3ST4Q9Y661 456 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 HELZP42694 1942 aaKnown RBP7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 DOCK8Q8NF50 2099 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 IGLV3-10A0A075B6K4 115 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 A0A1W2PRU2 124 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 NDUFAB1O14561 156 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 TP73O15350 636 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 CST8O60676 142 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 STC2O76061 302 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 FAM107AO95990 144 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 RHOP08100 348 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 HNRNPA1P09651 372 aaKnown RBP eCLIP7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 GABRR2P28476 465 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 LSP1P33241 339 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 RPL21P46778 160 aaKnown RBP7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 PPP3CCP48454 512 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 TBX4P57082 545 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 NRG1Q02297 640 aaPredicted RBP7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 GBE1Q04446 702 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 TCEAL5Q5H9L2 206 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 PPP6R3Q5H9R7 873 aaPredicted RBP7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 PPM1LQ5SGD2 360 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 ZNF697Q5TEC3 545 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 KCTD16Q68DU8 428 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 NCBP2-AS2Q69YL0 99 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 SYCE2Q6PIF2 218 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 ZDHHC24Q6UX98 284 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 NPNTQ6UXI9 565 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 YTHDF3Q7Z739 585 aaKnown RBP7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 ITIH5Q86UX2 942 aa7.22□□□□□ -1.25
HMGCS2-204ENST00000544913 GLIS1Q8NBF1 620 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms