RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 MSCO60682 206 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 TRIM16O95361 564 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SLC2A3P11169 496 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ZNF132P52740 706 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SLC25A11Q02978 314 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 LRRC36Q1X8D7 754 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 FAM83EQ2M2I3 478 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 LRRC8BQ6P9F7 803 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 LRRC74BQ6ZQY2 392 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 RELL1Q8IUW5 271 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 PSTKQ8IV42 348 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 FITM2Q8N6M3 262 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 WNT8BQ93098 351 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 C18orf25Q96B23 403 aaPredicted RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 PABPC5Q96DU9 382 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 TEPSINQ96N21 525 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 TBC1D10AQ9BXI6 508 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 BCO2Q9BYV7 579 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 RNPEPQ9H4A4 650 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SYBUQ9NX95 663 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 STX18Q9P2W9 335 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 ZNF180Q9UJW8 692 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ATP11BQ9Y2G3 1177 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 PTPRJQ12913 1337 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 CASTOR2A6NHX0 329 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 C2CD4BA6NLJ0 364 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 C16orf96A6NNT2 1141 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 A8MUI8 341 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 E5RI56 91 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 GPR25O00155 361 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 MDM4O15151 490 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 TADA2AO75478 443 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ASMTLO95671 621 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 RPLP2P05387 115 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 ERVK-10P10266 1014 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ZNF157P51786 506 aaPredicted RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 ARHGDIAP52565 204 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SIX1Q15475 284 aaPredicted RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 AGAP9Q5VTM2 703 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 CES3Q6UWW8 571 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 GPR142Q7Z601 462 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ANKS1BQ7Z6G8 1248 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 TOP6BLQ8N6T0 577 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 B3GALNT2Q8NCR0 500 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ACMSDQ8TDX5 336 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 CASP10Q92851 521 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 CCDC126Q96EE4 140 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SNX27Q96L92 541 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 CATSPER2Q96P56 530 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 KLHL4Q9C0H6 718 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 PKD2L2Q9NZM6 624 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ADAMTSL1Q8N6G6 1762 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 LOC100653049A0A140TA62 436 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 A0A1B0GW55 424 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 E9PBE3 544 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 KLHL41O60662 606 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 PIAS1O75925 651 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 KRT34O76011 436 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 C22orf31O95567 290 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 USP17L7P0C7H9 530 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DUX4L2P0CJ85 424 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DUX4L3P0CJ86 424 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DUX4L4P0CJ87 422 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DUX4L5P0CJ88 424 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DUX4L6P0CJ89 424 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DUX4L7P0CJ90 424 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 CREB1P16220 341 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 MAP4P27816 1152 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 THPOP40225 353 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 RAB27AP51159 221 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 KRR1Q13601 381 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 FLOT2Q14254 428 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 RABGAP1LQ5R372 815 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 KIAA1841Q6NSI8 718 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 C15orf39Q6ZRI6 1047 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ALYREFQ86V81 257 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 PLD5Q8N7P1 536 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 NAT8LQ8N9F0 302 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 MCRS1Q96EZ8 462 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 VAT1Q99536 393 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ZBTB18Q99592 522 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SHCBP1LQ9BZQ2 653 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 STN1Q9H668 368 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 PARVBQ9HBI1 364 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DUX4Q9UBX2 424 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 VTI1BQ9UEU0 232 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SORCS3Q9UPU3 1222 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 TRPV2Q9Y5S1 764 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 A0A087X1B8 175 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 RNF103-CHMP3A0A140T963 221 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 FZD9O00144 591 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 NFKBIEO00221 500 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 TGDSO95455 350 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 JCHAINP01591 159 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 CDH5P33151 784 aaPredicted RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 CRHR1P34998 444 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 MATKP42679 507 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 AIF1P55008 147 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DEFA1P59665 94 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DEFA3P59666 94 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms