RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 KREMEN1Q96MU8 473 aa16.86■□□□□ 0.29
DDX55-212ENST00000544738 ELOVL2Q9NXB9 296 aa16.86■□□□□ 0.29
DDX55-212ENST00000544738 WSB2Q9NYS7 404 aaPredicted RBP16.86■□□□□ 0.29
DDX55-212ENST00000544738 PCDHGB2Q9Y5G2 931 aa16.86■□□□□ 0.29
DDX55-212ENST00000544738 PTPRQQ9UMZ3 2332 aa16.86■□□□□ 0.29
DDX55-212ENST00000544738 SPTA1P02549 2419 aa16.85■□□□□ 0.29
DDX55-212ENST00000544738 A0A1B0GVT2 93 aa16.85■□□□□ 0.29
DDX55-212ENST00000544738 TNFSF14O43557 240 aa16.85■□□□□ 0.29
DDX55-212ENST00000544738 SLC11A2P49281 568 aa16.85■□□□□ 0.29
DDX55-212ENST00000544738 ARID5AQ03989 594 aa16.85■□□□□ 0.29
DDX55-212ENST00000544738 METTL3Q86U44 580 aaKnown RBP16.85■□□□□ 0.29
DDX55-212ENST00000544738 CREBRFQ8IUR6 639 aa16.85■□□□□ 0.29
DDX55-212ENST00000544738 MLKLQ8NB16 471 aa16.85■□□□□ 0.29
DDX55-212ENST00000544738 STK32AQ8WU08 396 aa16.85■□□□□ 0.29
DDX55-212ENST00000544738 TRIM62Q9BVG3 475 aa16.85■□□□□ 0.29
DDX55-212ENST00000544738 EIF2B4Q9UI10 523 aaKnown RBP16.85■□□□□ 0.29
DDX55-212ENST00000544738 PIK3R2O00459 728 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 RRP8O43159 456 aaKnown RBP16.84■□□□□ 0.29
DDX55-212ENST00000544738 IRAK2O43187 625 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 MSI1O43347 362 aaKnown RBP16.84■□□□□ 0.29
DDX55-212ENST00000544738 SYNCRIPO60506 623 aaKnown RBP16.84■□□□□ 0.29
DDX55-212ENST00000544738 TSPAN3O60637 253 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 IGLV3-27P01718 113 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 HOXD9P28356 352 aaPredicted RBP16.84■□□□□ 0.29
DDX55-212ENST00000544738 GPD2P43304 727 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 RPL34P49207 117 aaKnown RBP16.84■□□□□ 0.29
DDX55-212ENST00000544738 CSNK1EP49674 416 aaKnown RBP16.84■□□□□ 0.29
DDX55-212ENST00000544738 CFHR1Q03591 330 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 MPP7Q5T2T1 576 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 SMYD5Q6GMV2 418 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 TRIM65Q6PJ69 517 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 GBP6Q6ZN66 633 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 ZNF557Q8N988 423 aaPredicted RBP16.84■□□□□ 0.29
DDX55-212ENST00000544738 CADM4Q8NFZ8 388 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 WFIKKN2Q8TEU8 576 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 AZIN2Q96A70 460 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 CIPCQ9C0C6 399 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 MIS12Q9H081 205 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 ST7Q9NRC1 585 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 CLEC4EQ9ULY5 219 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 NFE2L3Q9Y4A8 694 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 AK5Q9Y6K8 562 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 ATMQ13315 3056 aa16.84■□□□□ 0.29
DDX55-212ENST00000544738 METTL12A8MUP2 240 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 E9PAM4 449 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 KCNK3O14649 394 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 TLX3O43711 291 aaPredicted RBP16.83■□□□□ 0.28
DDX55-212ENST00000544738 LETM1O95202 739 aaPredicted RBP16.83■□□□□ 0.28
DDX55-212ENST00000544738 CALCAP01258 141 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 JUPP14923 745 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 IL12RB1P42701 662 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 TBX4P57082 545 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 NNTQ13423 1086 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 ZNF234Q14588 700 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 FUT11Q495W5 492 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 BEND5Q7L4P6 421 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 CLEC4CQ8WTT0 213 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 ZNF606Q8WXB4 792 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 SERPINB11Q96P15 392 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 DDX50Q9BQ39 737 aaKnown RBP16.83■□□□□ 0.28
DDX55-212ENST00000544738 ITM2CQ9NQX7 267 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 PLA2G4CQ9UP65 541 aa16.83■□□□□ 0.28
DDX55-212ENST00000544738 GTPBP10A4D1E9 387 aaKnown RBP16.82■□□□□ 0.28
DDX55-212ENST00000544738 KCNJ18B7U540 433 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 ACSL4O60488 711 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 PTPRNQ16849 979 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 TPD52L1Q16890 204 aaPredicted RBP16.82■□□□□ 0.28
DDX55-212ENST00000544738 KIF19Q2TAC6 998 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 SERPINA13PQ6UXR4 307 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 GPR155Q7Z3F1 870 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 TMPRSS12Q86WS5 348 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 SNX19Q92543 992 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 FAM149B1Q96BN6 582 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 NXPE2Q96DL1 559 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 CRACR2AQ9BSW2 395 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 SLC4A5Q9BY07 1137 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 TLR6Q9Y2C9 796 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 SNX11Q9Y5W9 270 aa16.82■□□□□ 0.28
DDX55-212ENST00000544738 TYW5A2RUC4 315 aaKnown RBP16.81■□□□□ 0.28
DDX55-212ENST00000544738 THAP12O43422 761 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 EPHX1P07099 455 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 HLA-FP30511 346 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 OXTRP30559 389 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 GNA15P30679 374 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 GRK6P43250 576 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 MTIF2P46199 727 aaKnown RBP16.81■□□□□ 0.28
DDX55-212ENST00000544738 CLDN6P56747 220 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 EXOC3L4Q17RC7 722 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 C6orf118Q5T5N4 469 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 PIK3R6Q5UE93 754 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 TMEM215Q68D42 235 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 KIAA0907Q7Z7F0 614 aaPredicted RBP16.81■□□□□ 0.28
DDX55-212ENST00000544738 TMEM110Q86TL2 294 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 TMPRSS6Q8IU80 811 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 FAM114A1Q8IWE2 563 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 AHI1Q8N157 1196 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.81■□□□□ 0.28
DDX55-212ENST00000544738 PRCCQ92733 491 aaPredicted RBP16.81■□□□□ 0.28
DDX55-212ENST00000544738 SIPA1Q96FS4 1042 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 MED15Q96RN5 788 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms