RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 USP51Q70EK9 711 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 PEG10Q86TG7 708 aaKnown RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 GGNQ86UU5 652 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 ANKRD44Q8N8A2 993 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 ABHD11Q8NFV4 315 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 OR52L2PQ8NGH6 319 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 RFFLQ8WZ73 363 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 LENG9Q96B70 501 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 APOPT1Q96IL0 206 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 NEUROD6Q96NK8 337 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 OLA1Q9NTK5 396 aaKnown RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 TMLHEQ9NVH6 421 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 CNPY2Q9Y2B0 182 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 COPG1Q9Y678 874 aaKnown RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 CYP46A1Q9Y6A2 500 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 DENND4BO75064 1496 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 ITIH6Q6UXX5 1313 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 STRCQ7RTU9 1775 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 POGZQ7Z3K3 1410 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 C3P01024 1663 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 CCDC196A0A1B0GTZ2 297 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 HNRNPRO43390 633 aaKnown RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 ANP32CO43423 234 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 RNASEH2AO75792 299 aaKnown RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 URI1O94763 535 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 RTN3O95197 1032 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 DLDP09622 509 aaKnown RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 JAK3P52333 1124 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 COPB1P53618 953 aaKnown RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 CDK18Q07002 472 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 KRT32Q14532 448 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 UBAP2Q5T6F2 1119 aaKnown RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 KYAT3Q6YP21 454 aaKnown RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 ZNF551Q7Z340 670 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 VRK3Q8IV63 474 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 KCNG4Q8TDN1 519 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 KCNJ9Q92806 393 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 EDC3Q96F86 508 aaKnown RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 SNX18Q96RF0 628 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 BARD1Q99728 777 aaKnown RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 MACROD1Q9BQ69 325 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 CHCHD6Q9BRQ6 235 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 CINPQ9BW66 212 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-207ENST00000544052 SNX15Q9NRS6 342 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 ABHD10Q9NUJ1 306 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 B3GNT3Q9Y2A9 372 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 GDAQ9Y2T3 454 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 TSC22D4Q9Y3Q8 395 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 ABCC1P33527 1531 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 PLCH2O75038 1416 aa4.11□□□□□ -1.75
SCFD1-207ENST00000544052 SAC3D1A6NKF1 404 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 FYB1O15117 783 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 DHX16O60231 1041 aaKnown RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 PCP4P48539 62 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 EEFSECP57772 596 aaKnown RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 TLE3Q04726 772 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 EFEMP1Q12805 493 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 PLAC9Q5JTB6 97 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 WDR93Q6P2C0 686 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 DSTYKQ6XUX3 929 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 LCORLQ8N3X6 602 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 C12orf76Q8N812 135 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 ANKRD52Q8NB46 1076 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 NGDNQ8NEJ9 315 aaKnown RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 TDRD7Q8NHU6 1098 aaKnown RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 CENPIQ92674 756 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 ZNF503Q96F45 646 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 MMS19Q96T76 1030 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 FSD1LQ9BXM9 530 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 HDHD5Q9BXW7 423 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 USP44Q9H0E7 712 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 MTMR4Q9NYA4 1195 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 ADAMTS5Q9UNA0 930 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 NAALADL1Q9UQQ1 740 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 SAMD9LQ8IVG5 1584 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 PREX1Q8TCU6 1659 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 FNDC1Q4ZHG4 1894 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 CYP3A7-CYP3A51PA0A087WV96 503 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 A6NCN8 305 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 ZNF213O14771 459 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 TJP3O95049 919 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 C1RP00736 705 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 NPSP0C0P6 89 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 WEE2P0C1S8 567 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 NDUFB7P17568 137 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 CYP3A7P24462 503 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 PSMC2P35998 433 aaKnown RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 DCAF7P61962 342 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 RPP30P78346 268 aaKnown RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 SHC2P98077 582 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 THOC5Q13769 683 aaKnown RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 LY6G5CQ5SRR4 150 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 LIPMQ5VYY2 423 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 MZT2BQ6NZ67 158 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 H1FNTQ75WM6 255 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 LRRC8DQ7L1W4 858 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 R3HCC1LQ7Z5L2 792 aaKnown RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 LSM14AQ8ND56 463 aaKnown RBP4.1□□□□□ -1.75
SCFD1-207ENST00000544052 RNFT2Q96EX2 444 aa4.1□□□□□ -1.75
SCFD1-207ENST00000544052 MASTLQ96GX5 879 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms