RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 BHLHE22Q8NFJ8 381 aaPredicted RBP24.31■■□□□ 1.48
SHD-201ENST00000543264 PRPF19Q9UMS4 504 aaKnown RBP24.31■■□□□ 1.48
SHD-201ENST00000543264 A0A1B0GTW7 788 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 PRKCBP05771 671 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 MGAT1P26572 445 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 NR1H2P55055 460 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 INSCQ1MX18 579 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 STEAP4Q687X5 459 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 BNC2Q6ZN30 1099 aaPredicted RBP24.31■■□□□ 1.48
SHD-201ENST00000543264 TICAM1Q8IUC6 712 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 MOCOSQ96EN8 888 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 ACSS2Q9NR19 701 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 SIX4Q9UIU6 781 aa24.31■■□□□ 1.48
SHD-201ENST00000543264 ERVK-10P10266 1014 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 EMP3P54852 163 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 PPIDQ08752 370 aaKnown RBP24.3■■□□□ 1.48
SHD-201ENST00000543264 APOFQ13790 326 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 CYTH1Q15438 398 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 ZNF423Q2M1K9 1284 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 PLD6Q8N2A8 252 aaKnown RBP24.3■■□□□ 1.48
SHD-201ENST00000543264 TDRD5Q8NAT2 981 aaKnown RBP24.3■■□□□ 1.48
SHD-201ENST00000543264 SNRNP27Q8WVK2 155 aaKnown RBP24.3■■□□□ 1.48
SHD-201ENST00000543264 KBTBD7Q8WVZ9 684 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 PLEKHG4BQ96PX9 1271 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 RGSL1A5PLK6 1076 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 MAGEB3O15480 346 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 ENO3P13929 434 aaPredicted RBP24.3■■□□□ 1.48
SHD-201ENST00000543264 SERPINB8P50452 374 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 SEMA5AQ13591 1074 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 TMEM132AQ24JP5 1023 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 ZFP1Q6P2D0 407 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 NIFKQ9BYG3 293 aaKnown RBP24.3■■□□□ 1.48
SHD-201ENST00000543264 CEPT1Q9Y6K0 416 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 RPS6KL1Q9Y6S9 549 aa24.3■■□□□ 1.48
SHD-201ENST00000543264 SIP14410 1827 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 AMHP03971 560 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 F7P08709 466 aaPredicted RBP24.29■■□□□ 1.48
SHD-201ENST00000543264 HEATR6Q6AI08 1181 aaKnown RBP24.29■■□□□ 1.48
SHD-201ENST00000543264 TMEM192Q8IY95 271 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 ADAM32Q8TC27 787 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 FERMT1Q9BQL6 677 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 CILPO75339 1184 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 GLDCP23378 1020 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 MLH1P40692 756 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 EFNA5P52803 228 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 CEACAM7Q14002 265 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 METTL21CQ5VZV1 264 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 RNF149Q8NC42 400 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 IRGQQ8WZA9 623 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 RCN3Q96D15 328 aa24.29■■□□□ 1.48
SHD-201ENST00000543264 CDH2P19022 906 aaPredicted RBP24.28■■□□□ 1.48
SHD-201ENST00000543264 PIGGQ5H8A4 983 aa24.28■■□□□ 1.48
SHD-201ENST00000543264 SNX15Q9NRS6 342 aa24.28■■□□□ 1.48
SHD-201ENST00000543264 ZNF510Q9Y2H8 683 aa24.28■■□□□ 1.48
SHD-201ENST00000543264 HEMK1Q9Y5R4 338 aaPredicted RBP24.28■■□□□ 1.48
SHD-201ENST00000543264 STX16-NPEPL1H3BU86 382 aa24.28■■□□□ 1.48
SHD-201ENST00000543264 CXCL8P10145 99 aa24.28■■□□□ 1.48
SHD-201ENST00000543264 TCN1P20061 433 aaPredicted RBP24.28■■□□□ 1.48
SHD-201ENST00000543264 TPP2P29144 1249 aaPredicted RBP24.28■■□□□ 1.48
SHD-201ENST00000543264 MAP1SQ66K74 1059 aaPredicted RBP24.28■■□□□ 1.48
SHD-201ENST00000543264 PGLYRP2Q96PD5 576 aa24.28■■□□□ 1.48
SHD-201ENST00000543264 DHX35Q9H5Z1 703 aaKnown RBP24.28■■□□□ 1.48
SHD-201ENST00000543264 MTMR10Q9NXD2 777 aa24.28■■□□□ 1.48
SHD-201ENST00000543264 THEGQ9P2T0 379 aa24.28■■□□□ 1.48
SHD-201ENST00000543264 THSD7AQ9UPZ6 1657 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 B4GALT4O60513 344 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 ITGB3P05106 788 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 HNRNPCP07910 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
SHD-201ENST00000543264 CYP3A5P20815 502 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 EPHA3P29320 983 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 CCDC153Q494R4 210 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 C1orf127Q8N9H9 656 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 ARNTL2Q8WYA1 636 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 ZNF670Q9BS34 389 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 LIN28AQ9H9Z2 209 aaKnown RBP24.27■■□□□ 1.48
SHD-201ENST00000543264 VDRP11473 427 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 SDC4P31431 198 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 NRF1Q16656 503 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 DUS1LQ6P1R4 473 aaKnown RBP24.27■■□□□ 1.48
SHD-201ENST00000543264 TMEM126BQ8IUX1 230 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 DCLK2Q8N568 766 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 TRIML2Q8N7C3 387 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 SUDS3Q9H7L9 328 aaPredicted RBP24.27■■□□□ 1.48
SHD-201ENST00000543264 NRBP2Q9NSY0 501 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 BCAP29Q9UHQ4 241 aa24.27■■□□□ 1.48
SHD-201ENST00000543264 NFICP08651 508 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 PSMC3P17980 439 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 BORAQ6PGQ7 559 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 FAM83AQ86UY5 434 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 NETO2Q8NC67 525 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 NLRP7Q8WX94 980 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 TMIGD2Q96BF3 282 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 CEP41Q9BYV8 373 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 PGAP2Q9UHJ9 254 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 PGAM1P18669 254 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 TFE3P19532 575 aaPredicted RBP24.26■■□□□ 1.47
SHD-201ENST00000543264 PPP2R5DQ14738 602 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 USP41Q3LFD5 358 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 LSM12Q3MHD2 195 aaKnown RBP24.26■■□□□ 1.47
SHD-201ENST00000543264 LRRC71Q8N4P6 559 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms