RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SMPD4Q9NXE4 827 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 SLC12A6Q9UHW9 1150 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 VANGL2Q9ULK5 521 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 DRGXA6NNA5 263 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 WASH4PA8MWX3 477 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 SGK1O00141 431 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 FGF10O15520 208 aaPredicted RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 ACSL4O60488 711 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 GREM1O60565 184 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 PAPLNO95428 1278 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 FAM153BP0C7A2 387 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 IRF1P10914 325 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 PTPN2P17706 415 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 TACR2P21452 398 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 RBL1P28749 1068 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 CORO1AP31146 461 aaKnown RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 NRIP1P48552 1158 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 VPS41P49754 854 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 NTHL1P78549 312 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 COG7P83436 770 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 PRKD1Q15139 912 aaPredicted RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 FAM153CQ494X1 144 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 SLC45A4Q5BKX6 768 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 PRSS36Q5K4E3 855 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 BEND6Q5SZJ8 279 aaPredicted RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 FAM182AQ5T1J6 154 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 ZNF697Q5TEC3 545 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 AFMIDQ63HM1 303 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 RWDD4Q6NW29 188 aaKnown RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 FBXL22Q6P050 247 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 GSTA5Q7RTV2 222 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 CHSY1Q86X52 802 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 CDKL3Q8IVW4 592 aaPredicted RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 ARHGAP12Q8IWW6 846 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 RTL3Q8N8U3 475 aaKnown RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 EIF1ADQ8N9N8 165 aaKnown RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 AZIN2Q96A70 460 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 TIFAQ96CG3 184 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 RTP4Q96DX8 246 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 PRKD2Q9BZL6 878 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 ATXN3LQ9H3M9 355 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 TLE6Q9H808 572 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 NDFIP2Q9NV92 336 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 ARGLU1Q9NWB6 273 aaPredicted RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 ZDHHC7Q9NXF8 308 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 MPP6Q9NZW5 540 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 PPARGC1AQ9UBK2 798 aaKnown RBP13.66□□□□□ -0.22
CHFR-221ENST00000542714 ZNF212Q9UDV6 495 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 ASIC3Q9UHC3 531 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 FAM153AQ9UHL3 310 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 RAD54BQ9Y620 910 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 CPQQ9Y646 472 aa13.66□□□□□ -0.22
CHFR-221ENST00000542714 CFAP69A5D8W1 941 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 HACD1B0YJ81 288 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 CNTN5O94779 1100 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 RHOP08100 348 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 RHOQP17081 205 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 HDCP19113 662 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 RPL22P35268 128 aaKnown RBP13.65□□□□□ -0.22
CHFR-221ENST00000542714 SLC7A9P82251 487 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 SMAD3P84022 425 aaKnown RBP13.65□□□□□ -0.22
CHFR-221ENST00000542714 GALNT2Q10471 571 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 MTA1Q13330 715 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 TEAD2Q15562 447 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 C5orf22Q49AR2 442 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 ALFQ53S48 1182 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 Q6ZNB5 142 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 DENND1CQ8IV53 801 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 MAB21L3Q8N8X9 362 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 ART4Q93070 314 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 MRPL38Q96DV4 380 aaKnown RBP13.65□□□□□ -0.22
CHFR-221ENST00000542714 CELF6Q96J87 481 aaKnown RBP13.65□□□□□ -0.22
CHFR-221ENST00000542714 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 LGMNQ99538 433 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 SLC46A2Q9BY10 475 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 PRDM12Q9H4Q4 367 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 NOL6Q9H6R4 1146 aaKnown RBP13.65□□□□□ -0.22
CHFR-221ENST00000542714 CATSPERBQ9H7T0 1116 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 ZNF446Q9NWS9 450 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 WHRNQ9P202 907 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 CHD7Q9P2D1 2997 aa13.65□□□□□ -0.22
CHFR-221ENST00000542714 CLUHO75153 1309 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 TRAV19A0A0A6YYK7 116 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 CCDC195A0A1B0GUA6 201 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 KCNN4O15554 427 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 XYLBO75191 536 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 ERLIN1O75477 346 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 FGF19O95750 216 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 IFNB1P01574 187 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 PFKLP17858 780 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 SERPINB6P35237 376 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 SLC11A2P49281 568 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 HARS2P49590 506 aaKnown RBP13.64□□□□□ -0.23
CHFR-221ENST00000542714 HLTFQ14527 1009 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHFR-221ENST00000542714 PDK1Q15118 436 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 ACBD5Q5T8D3 534 aaPredicted RBP13.64□□□□□ -0.23
CHFR-221ENST00000542714 RFWD3Q6PCD5 774 aa13.64□□□□□ -0.23
CHFR-221ENST00000542714 RHBDF2Q6PJF5 856 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms