RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 DCAF4L1Q3SXM0 396 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 DNAL1Q4LDG9 190 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 RABGAP1LQ5R372 815 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 MARCH8Q5T0T0 291 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 TEDDM1Q5T9Z0 273 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 NCBP2-AS2Q69YL0 99 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 LRRC8BQ6P9F7 803 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 MTHFD1LQ6UB35 978 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 KCNT2Q6UVM3 1135 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ALKAL1Q6UXT8 129 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 LRRC74BQ6ZQY2 392 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 DPH6Q7L8W6 267 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 STRADAQ7RTN6 431 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 BNIPLQ7Z465 357 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ACOT1Q86TX2 421 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ZNF410Q86VK4 478 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ERO1BQ86YB8 467 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 MYLK4Q86YV6 388 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 CRLF3Q8IUI8 442 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 CCNJLQ8IV13 435 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 PSTKQ8IV42 348 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 HACE1Q8IYU2 909 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 CRYBG2Q8N1P7 616 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 C7orf31Q8N865 590 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ANKRD52Q8NB46 1076 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 SHCBP1Q8NEM2 672 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 OR6Y1Q8NGX8 325 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 FBXO27Q8NI29 283 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 PPTC7Q8NI37 304 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 MICAL1Q8TDZ2 1067 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 HTR3CQ8WXA8 447 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 SCG3Q8WXD2 468 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ARNTL2Q8WYA1 636 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ISL2Q96A47 359 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 MCUR1Q96AQ8 359 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 SPDL1Q96EA4 605 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 SNX27Q96L92 541 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ZNF778Q96MU6 729 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 SPATA13Q96N96 652 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ZMAT2Q96NC0 199 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 KCTD15Q96SI1 283 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 C16orf70Q9BSU1 422 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 C1QTNF2Q9BXJ5 285 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 B3GNT5Q9BYG0 378 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 SLC13A1Q9BZW2 595 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 CXCL16Q9H2A7 254 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 GPAMQ9HCL2 828 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 KRT82Q9NSB4 513 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 PCMTD2Q9NV79 361 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 DDX43Q9NXZ2 648 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 PPARGC1AQ9UBK2 798 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 AP4E1Q9UPM8 1137 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 SF3B1O75533 1304 aaKnown RBP eCLIP5.34□□□□□ -1.554e-6■■■■■ 120.3
ATPAF1-212ENST00000542495 CITO14578 2027 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 DPPA5A6NC42 116 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 GOLGA8CPA6NN73 597 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PRR5-ARHGAP8B1AHC4 643 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 SPECC1L-ADORA2AF8WAN1 911 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 H3BRJ5 948 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF195O14628 629 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PPP1R12AO14974 1030 aaPredicted RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PLIN3O60664 434 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 GLRA3O75311 464 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 MAP3K6O95382 1288 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 VTNP04004 478 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PROCP04070 461 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ALDOAP04075 364 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ENO1P06733 434 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 HOXD8P13378 290 aaPredicted RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 AMPD1P23109 780 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ADORA2AP29274 412 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 HOXA11P31270 313 aaPredicted RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 MAGEA12P43365 314 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ACADSBP45954 432 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 GLUD2P49448 558 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 VEGFBP49765 207 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ATXN1P54253 815 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 SARNPP82979 210 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ARHGAP8P85298 464 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 BTKQ06187 659 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 BST2Q10589 180 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PPIL2Q13356 520 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 THOC5Q13769 683 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PDE1CQ14123 709 aaPredicted RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 FRG1Q14331 258 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 CCDC6Q16204 474 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 INSCQ1MX18 579 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 SOWAHAQ2M3V2 549 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 MUM1Q2TAK8 710 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 DEFB115Q30KQ5 88 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 LINC01559Q495D7 138 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 FASTKD1Q53R41 847 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PPP6R3Q5H9R7 873 aaPredicted RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 MROH9Q5TGP6 573 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 OTUD1Q5VV17 481 aaPredicted RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 HEATR6Q6AI08 1181 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 TRIM68Q6AZZ1 485 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 OR52E8Q6IFG1 317 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 DLK2Q6UY11 383 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms