RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 FAXCQ5TGI0 409 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 MANEALQ5VSG8 457 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 IZUMO3Q5VZ72 239 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 ARHGAP36Q6ZRI8 547 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 SYDE1Q6ZW31 735 aaPredicted RBP10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 TADA2BQ86TJ2 420 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 CCDC25Q86WR0 208 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 CHSY1Q86X52 802 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 CFAP52Q8N1V2 620 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 CCDC110Q8TBZ0 833 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 TBC1D31Q96DN5 1066 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 SNF8Q96H20 258 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 OLFM3Q96PB7 478 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 CDK5RAP1Q96SZ6 601 aaKnown RBP10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 FUT8Q9BYC5 575 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 ADAM7Q9H2U9 754 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 SLC28A3Q9HAS3 691 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 MSRAQ9UJ68 235 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 ANAPC5Q9UJX4 755 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 ASB3Q9Y575 518 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 HCFC2Q9Y5Z7 792 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 EYSQ5T1H1 3165 aa10.66□□□□□ -0.7
PABPC1P4-201ENST00000539977 MYO16Q9Y6X6 1858 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 GOLGA8MH3BSY2 632 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 KCNK1O00180 336 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 DFFAO00273 331 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 TSPAN3O60637 253 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 STC2O76061 302 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 SLC6A4P31645 630 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 CHKAP35790 457 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 NRIP1P48552 1158 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 HARS2P49590 506 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 DRG2P55039 364 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 SMAD3P84022 425 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 RING1Q06587 406 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 CALCOCO2Q13137 446 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 NNTQ13423 1086 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 PABPC1LQ4VXU2 614 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 TSEN2Q8NCE0 465 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 TFB1MQ8WVM0 346 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 MRPS31Q92665 395 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 ART4Q93070 314 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 ZFRQ96KR1 1074 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 C1orf74Q96LT6 269 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 RPRD1AQ96P16 312 aaPredicted RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 QKIQ96PU8 341 aaKnown RBP eCLIP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 FMO2Q99518 471 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 KLF16Q9BXK1 252 aaPredicted RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 KLC2Q9H0B6 622 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 PCDH9Q9HC56 1237 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 ASAH2Q9NR71 780 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 DNMT3BQ9UBC3 853 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 HBS1LQ9Y450 684 aaKnown RBP10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 CPQQ9Y646 472 aa10.65□□□□□ -0.7
PABPC1P4-201ENST00000539977 TCRBV7S3A2A0A539 114 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 BCLAF3A2AJT9 711 aaKnown RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 CKMP06732 381 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 TACR2P21452 398 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 STIP1P31948 543 aaKnown RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 KPNA1P52294 538 aaPredicted RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 COG7P83436 770 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 GAD2Q05329 585 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 CASP8Q14790 479 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 SLC5A9Q2M3M2 681 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 FAM133BQ5BKY9 247 aaKnown RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 UBAP2Q5T6F2 1119 aaKnown RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 ANKRD22Q5VYY1 191 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 NUGGCQ68CJ6 796 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 EMBQ6PCB8 327 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 KLHDC10Q6PID8 442 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 LRRC31Q6UY01 552 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 CDKL3Q8IVW4 592 aaPredicted RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZNF683Q8IZ20 524 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 LGI2Q8N0V4 545 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 BHMTQ93088 406 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 P2RY11Q96G91 374 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 SAMD11Q96NU1 681 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 PRMT1Q99873 361 aaKnown RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 IGFLR1Q9H665 355 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 TLE6Q9H808 572 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 PLXNA3P51805 1871 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 CCDC195A0A1B0GUA6 201 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 ACSL4O60488 711 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 RHOP08100 348 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 ITIH2P19823 946 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 HOXC13P31276 330 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 PPP3CCP48454 512 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 SGSHP51688 502 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 BASP1P80723 227 aaKnown RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 DHX9Q08211 1270 aaKnown RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 XRCC4Q13426 336 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 PDK1Q15118 436 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 HEATR6Q6AI08 1181 aaKnown RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 GRASPQ7Z6J2 395 aaPredicted RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 ARHGAP12Q8IWW6 846 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZNF276Q8N554 614 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 SHKBP1Q8TBC3 707 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 ADAMTS19Q8TE59 1207 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 HTR3CQ8WXA8 447 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms