RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CFAP97Q9P2B7 532 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PPARGC1AQ9UBK2 798 aaKnown RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 CPQQ9Y646 472 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 ALPK3Q96L96 1907 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 A0A1W2PRU2 124 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TARSL2A2RTX5 802 aaKnown RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 LRRC53A6NM62 1247 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PRR33A8MZF0 331 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 LEFTY2O00292 366 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PPEF2O14830 753 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 LAMTOR5O43504 91 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PSTPIP1O43586 416 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SPOPO43791 374 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TBX10O75333 385 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SEC24AO95486 1093 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 OAS1P00973 400 aaKnown RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 RHOQP17081 205 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 HOXA6P31267 233 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 L1CAMP32004 1257 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 RAP1GAPP47736 663 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SCNN1BP51168 640 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 HDAC4P56524 1084 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 DMPKQ09013 629 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 IFRD2Q12894 506 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 CRYMQ14894 314 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PARP15Q460N3 678 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SPDYCQ5MJ68 293 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SPOPLQ6IQ16 392 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TAS1R1Q7RTX1 841 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 ADGRD2Q7Z7M1 963 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 KBTBD6Q86V97 674 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM151BQ8IW70 566 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 RHOT1Q8IXI2 618 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 MCOLN2Q8IZK6 566 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 FBXL6Q8N531 539 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 ZSWIM2Q8NEG5 633 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TRIM58Q8NG06 486 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 CCHCR1Q8TD31 782 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SLC35B4Q969S0 331 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PAAF1Q9BRP4 392 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 VN1R3Q9BXE9 311 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 ISCUQ9H1K1 167 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 MAGEH1Q9H213 219 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 AASDHPPTQ9NRN7 309 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 ABHD10Q9NUJ1 306 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 AMFRQ9UKV5 643 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 EFR3BQ9Y2G0 817 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 EPN1Q9Y6I3 576 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 A0A1W2PQH9 124 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PRR5-ARHGAP8B1AHC4 643 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 H3BQ06 376 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 RFXAPO00287 272 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TOR1BO14657 336 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 ZW10O43264 779 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 RHOBTB1O94844 696 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PAPSS2O95340 614 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 ADCY5O95622 1261 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 FTLP02792 175 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 HMGA1P17096 107 aaKnown RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 LMO2P25791 158 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 CTNNA2P26232 953 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 GCKP35557 465 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 DGKEP52429 567 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 CAMK1Q14012 370 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 POLD3Q15054 466 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 RCN1Q15293 331 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF528Q3MIS6 628 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PKDCCQ504Y2 493 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SLC44A4Q53GD3 710 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 CFAP58Q5T655 872 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 C11orf63Q6NUN7 778 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TRIM67Q6ZTA4 783 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TMCO2Q7Z6W1 182 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SLFN11Q7Z7L1 901 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM173Q86WV6 379 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TMC8Q8IU68 726 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 RNF135Q8IUD6 432 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 RAVER1Q8IY67 606 aaKnown RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 NIPA2Q8N8Q9 360 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 LILRB1Q8NHL6 650 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 WHAMMQ8TF30 809 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 RNF25Q96BH1 459 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 PDLIM2Q96JY6 352 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM209Q96SK2 561 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 VAT1Q99536 393 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 C11orf70Q9BRQ4 267 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 KLF16Q9BXK1 252 aaPredicted RBP3.69□□□□□ -1.82
PTPN22-211ENST00000538253 OSBPL7Q9BZF2 842 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 CEP44Q9C0F1 390 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 POMKQ9H5K3 350 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF304Q9HCX3 659 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SIX2Q9NPC8 291 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SPHK2Q9NRA0 654 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 STOML2Q9UJZ1 356 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 SLC27A6Q9Y2P4 619 aa3.69□□□□□ -1.82
PTPN22-211ENST00000538253 A0A0B4J203 849 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 KANSL1LA0AUZ9 987 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ILVBLA1L0T0 632 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CHURC1-FNTBB4DL54 471 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms