RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 RRN3Q9NYV6 651 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 COPEO14579 308 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 RTN2O75298 545 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 STAU1O95793 577 aaKnown RBP12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 LMO2P25791 158 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 GARSP41250 739 aaKnown RBP12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 SLC12A1Q13621 1099 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 PIGZQ86VD9 579 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 CMTM8Q8IZV2 173 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 TET1Q8NFU7 2136 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 SLC35C1Q96A29 364 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 CHMP6Q96FZ7 201 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 GMIPQ9P107 970 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 DNMT3BQ9UBC3 853 aaKnown RBP12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 ADAM12O43184 909 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 CEBPBP17676 345 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 PFKLP17858 780 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 MLF2Q15773 248 aaPredicted RBP12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 FBXO43Q4G163 708 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 TRIM67Q6ZTA4 783 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 C3orf58Q8NDZ4 430 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 MDM1Q8TC05 714 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 OTUB2Q96DC9 234 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 TBC1D17Q9HA65 648 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 ETNK1Q9HBU6 452 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 DDIT4Q9NX09 232 aa12.59□□□□□ -0.39
TSPAN9-206ENST00000537971 NOL3O60936 208 aaKnown RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 KRT37O76014 449 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 SULT1E1P49888 294 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 DEUP1Q05D60 604 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 RBBP5Q15291 538 aaKnown RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 CNGA2Q16280 664 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 CRELD2Q6UXH1 353 aaPredicted RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 IRF2BP1Q8IU81 584 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 ST13P5Q8NFI4 369 aaPredicted RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 ATXN7L3BQ96GX2 97 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 KLF6Q99612 283 aaPredicted RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 DHX35Q9H5Z1 703 aaKnown RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 ACTR5Q9H9F9 607 aaPredicted RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 LTFP02788 710 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 ZNF677Q86XU0 584 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 C4orf33Q8N1A6 199 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 OVCA2Q8WZ82 227 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 PPWD1Q96BP3 646 aaKnown RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 FAM84AQ96KN4 292 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 MUC3BQ9H195 1237 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 VPS11Q9H270 941 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 DMAC2Q9NW81 257 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 TPX2Q9ULW0 747 aaKnown RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 FAM187AA6NFU0 413 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 MDH1P40925 334 aaKnown RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 VIPR2P41587 438 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 DLX2Q07687 328 aaPredicted RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 TFDP2Q14188 446 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 TAF11Q15544 211 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 EFHC2Q5JST6 749 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 SRLQ86TD4 932 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 GSTCDQ8NEC7 633 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 OR10T2Q8NGX3 314 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 ITFG1Q8TB96 612 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 AGR3Q8TD06 166 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 EXT2Q93063 718 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 ARL8AQ96BM9 186 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 RPRD1AQ96P16 312 aaPredicted RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 DDX23Q9BUQ8 820 aaKnown RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 RC3H2Q9HBD1 1191 aaKnown RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 KLHL8Q9P2G9 620 aaPredicted RBP12.58□□□□□ -0.4
TSPAN9-206ENST00000537971 CCDC78A2IDD5 438 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 TCP11X1B4DZS4 312 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 POLR2EP19388 210 aaKnown RBP12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 FECHP22830 423 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 ZBTB6Q15916 424 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 SMTNL2Q2TAL5 461 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 TMEM184AQ6ZMB5 413 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 JAMLQ86YT9 394 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 CARNMT1Q8N4J0 409 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 C12orf50Q8NA57 414 aaPredicted RBP12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 LRRC15Q8TF66 581 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 CNGB3Q9NQW8 809 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 SLC25A13Q9UJS0 675 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 IQANK1A0A1B0GTG1 560 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 ABLIM3O94929 683 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 KRT3P12035 628 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 PON1P27169 355 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 DBN1Q16643 649 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 FNDC3BQ53EP0 1204 aaKnown RBP12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 COBLL1Q53SF7 1204 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 MIPOL1Q8TD10 442 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 EDEM1Q92611 657 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 PRMT1Q99873 361 aaKnown RBP12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 P2RY13Q9BPV8 354 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 H3BQF6 201 aa12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 XPO1O14980 1071 aaKnown RBP12.57□□□□□ -0.4
TSPAN9-206ENST00000537971 MAP3K6O95382 1288 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms