RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 SEPT6Q14141 434 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 SV2AQ7L0J3 742 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 KCNK18Q7Z418 384 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 MMAAQ8IVH4 418 aaKnown RBP9.56□□□□□ -0.88
USP28-205ENST00000537706 TNIP3Q96KP6 325 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 MRPL45Q9BRJ2 306 aaKnown RBP9.56□□□□□ -0.88
USP28-205ENST00000537706 PISDQ9UG56 409 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 SERGEFQ9UGK8 458 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 CYTH4Q9UIA0 394 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 RASAL2Q9UJF2 1139 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 STRIP2Q9ULQ0 834 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 PHTF1Q9UMS5 762 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 CKAP5Q14008 2032 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 TARSL2A2RTX5 802 aaKnown RBP9.56□□□□□ -0.88
USP28-205ENST00000537706 PMS2P1A4D2B8 440 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 EME2A4GXA9 379 aaPredicted RBP9.56□□□□□ -0.88
USP28-205ENST00000537706 ASLP04424 464 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 HMBSP08397 361 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 KRT7P08729 469 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 GRNP28799 593 aaKnown RBP9.56□□□□□ -0.88
USP28-205ENST00000537706 MAT2AP31153 395 aaKnown RBP9.56□□□□□ -0.88
USP28-205ENST00000537706 PSMD8P48556 350 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 FGL2Q14314 439 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 BMT2Q1RMZ1 405 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 CAPRIN2Q6IMN6 1127 aaKnown RBP9.56□□□□□ -0.88
USP28-205ENST00000537706 GUSBP11Q6P575 273 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 DTHD1Q6ZMT9 781 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 GPBP1Q86WP2 473 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 SLC34A3Q8N130 599 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 TEX19Q8NA77 164 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 FAM174AQ8TBP5 190 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 TMEM159Q96B96 161 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 TMEM74Q96NL1 305 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 REEP2Q9BRK0 252 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 CALN1Q9BXU9 219 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 KRT82Q9NSB4 513 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 ABCB8Q9NUT2 735 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 TMEM30AQ9NV96 361 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 SALL4Q9UJQ4 1053 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 SCML2Q9UQR0 700 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 CSNK1G3Q9Y6M4 447 aa9.56□□□□□ -0.88
USP28-205ENST00000537706 PLXNA2O75051 1894 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 LY6G6EA0A0G2JKS1 128 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 A0A1W2PQ27 194 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 A0A1W2PQ64 194 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 A0A1W2PQC6 194 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 MDM4O15151 490 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 SLC7A4O43246 635 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 SIN3BO75182 1162 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 AKT2P31751 481 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 PPP2CBP62714 309 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 PPP2CAP67775 309 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 DUOXA2Q1HG44 320 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 HNRNPA1L2Q32P51 320 aaKnown RBP9.55□□□□□ -0.88
USP28-205ENST00000537706 TMEM164Q5U3C3 297 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 CRTC1Q6UUV9 634 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 DYMQ7RTS9 669 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 TRIM69Q86WT6 500 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 DCP2Q8IU60 420 aaKnown RBP9.55□□□□□ -0.88
USP28-205ENST00000537706 DENND1CQ8IV53 801 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.55□□□□□ -0.88
USP28-205ENST00000537706 CXorf38Q8TB03 319 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 IL12RB2Q99665 862 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 DPEP3Q9H4B8 488 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 INTS13Q9NVM9 706 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.55□□□□□ -0.88
USP28-205ENST00000537706 NAGPAQ9UK23 515 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 AGO1Q9UL18 857 aaKnown RBP9.55□□□□□ -0.88
USP28-205ENST00000537706 CLEC4EQ9ULY5 219 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 U3KQA8 63 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 LRRK2Q5S007 2527 aa9.55□□□□□ -0.88
USP28-205ENST00000537706 EDDM13A0A1B0GTR0 161 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 PP2D1A8MPX8 630 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 TISP43B9A030 160 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 CNTN5O94779 1100 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 CLSTN1O94985 981 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 GNLYP22749 145 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 HLA-FP30511 346 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 NOS2P35228 1153 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 ZNF131P52739 623 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 EHHADHQ08426 723 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 POM121L1PQ3SYA9 428 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 HYIQ5T013 277 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 C1QL3Q5VWW1 255 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.54□□□□□ -0.88
USP28-205ENST00000537706 CCDC117Q8IWD4 279 aaPredicted RBP9.54□□□□□ -0.88
USP28-205ENST00000537706 FAM114A1Q8IWE2 563 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 GPBAR1Q8TDU6 330 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 SAAL1Q96ER3 474 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 SLC12A9Q9BXP2 914 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 DNAJC28Q9NX36 388 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 DONSONQ9NYP3 566 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 USP9YO00507 2555 aaPredicted RBP9.54□□□□□ -0.88
USP28-205ENST00000537706 A0A1W2PQH9 124 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 ZNF891A8MT65 544 aaPredicted RBP9.54□□□□□ -0.88
USP28-205ENST00000537706 MUSKO15146 869 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 REC8O95072 547 aa9.54□□□□□ -0.88
USP28-205ENST00000537706 GIMD1P0DJR0 217 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms