RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 CYP2C18P33260 490 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 MSH2P43246 934 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 GLUD2P49448 558 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 SULT1E1P49888 294 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 SLC18A2Q05940 514 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 CCDC15Q0P6D6 951 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 ADIGQ0VDE8 80 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 NAB1Q13506 487 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 MPP2Q14168 576 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 DSC3Q14574 896 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 PDK1Q15118 436 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 SMAD2Q15796 467 aaKnown RBP9.97□□□□□ -0.81
CHKA-207ENST00000533728 PDK4Q16654 411 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 CA9Q16790 459 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 BBS9Q3SYG4 887 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 MSS51Q4VC12 460 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 SPDYAQ5MJ70 313 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 LGSNQ5TDP6 509 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 RNF43Q68DV7 783 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 C1orf228Q6PIY5 440 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 NPNTQ6UXI9 565 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 CLEC20AQ6ZU45 233 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 PAQR9Q6ZVX9 377 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 ZC3H18Q86VM9 953 aaKnown RBP9.97□□□□□ -0.81
CHKA-207ENST00000533728 DEFB106AQ8N104 65 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 VPS52Q8N1B4 723 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 SIX6OS1Q8N1H7 587 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 GSTCDQ8NEC7 633 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 ZNF398Q8TD17 642 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 FBF1Q8TES7 1133 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 DCAKDQ8WVC6 231 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 WNT8BQ93098 351 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 PGBD4Q96DM1 585 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 MTBPQ96DY7 904 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 TGS1Q96RS0 853 aaKnown RBP9.97□□□□□ -0.81
CHKA-207ENST00000533728 KCTD15Q96SI1 283 aaPredicted RBP9.97□□□□□ -0.81
CHKA-207ENST00000533728 PAFAH2Q99487 392 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 SYT15Q9BQS2 421 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 B3GNT5Q9BYG0 378 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 OSBPL7Q9BZF2 842 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 POPDC2Q9HBU9 364 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 CSNK1G1Q9HCP0 422 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 STARD7Q9NQZ5 370 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 RAB6BQ9NRW1 208 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 MKS1Q9NXB0 559 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 STARD13Q9Y3M8 1113 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
CHKA-207ENST00000533728 COL4A3Q01955 1670 aa9.96□□□□□ -0.81
CHKA-207ENST00000533728 NUP205Q92621 2012 aa9.96□□□□□ -0.81
CHKA-207ENST00000533728 A0A0A0MRY4 1105 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 TCRBV7S3A2A0A539 114 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 TCP11X1B4DZS4 312 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 PIK3R2O00459 728 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 MTSS1O43312 755 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 IL1BP01584 269 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 ODC1P11926 461 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 CREB1P16220 341 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 CNTFP26441 200 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 SSTR1P30872 391 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 HTR7P34969 479 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 ELK3P41970 407 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 SERPINB9P50453 376 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 WDR4P57081 412 aaKnown RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 DAOAP59103 153 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 ZNF33AQ06730 810 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 GRIK3Q13003 919 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 PRKD1Q15139 912 aaPredicted RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 MAPRE1Q15691 268 aaKnown RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 TTC31Q49AM3 519 aaPredicted RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 RAB6CQ53S08 254 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 RNF187Q5TA31 235 aaPredicted RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 WSCD1Q658N2 575 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 NUGGCQ68CJ6 796 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 NCBP2-AS2Q69YL0 99 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 HEATR6Q6AI08 1181 aaKnown RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 GDF6Q6KF10 455 aaPredicted RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 CXCL17Q6UXB2 119 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 TRPM8Q7Z2W7 1104 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 SPATA21Q7Z572 469 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 CHSY1Q86X52 802 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 TFB1MQ8WVM0 346 aaKnown RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 SMARCD1Q96GM5 515 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 SPATA13Q96N96 652 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 ELAC2Q9BQ52 826 aaKnown RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 WDR83Q9BRX9 315 aaKnown RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 NAT9Q9BTE0 207 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 RAB6CQ9H0N0 254 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 VPS11Q9H270 941 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 GPATCH2LQ9NWQ4 482 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 DDX43Q9NXZ2 648 aaKnown RBP9.96□□□□□ -0.82
CHKA-207ENST00000533728 TBK1Q9UHD2 729 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 IKBKGQ9Y6K9 419 aa9.96□□□□□ -0.82
CHKA-207ENST00000533728 GREB1Q4ZG55 1949 aa9.95□□□□□ -0.82
CHKA-207ENST00000533728 TCRBV9S1A1TA0A576 114 aa9.95□□□□□ -0.82
CHKA-207ENST00000533728 CFAP73A6NFT4 308 aa9.95□□□□□ -0.82
CHKA-207ENST00000533728 GOLGA8MH3BSY2 632 aa9.95□□□□□ -0.82
CHKA-207ENST00000533728 M0QZQ0 153 aa9.95□□□□□ -0.82
CHKA-207ENST00000533728 PDGFBP01127 241 aaPredicted RBP9.95□□□□□ -0.82
CHKA-207ENST00000533728 CHRNA1P02708 482 aa9.95□□□□□ -0.82
CHKA-207ENST00000533728 C1QAP02745 245 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms