RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ZNF358Q9NW07 568 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 CNOT11Q9UKZ1 510 aaKnown RBP15.02■□□□□ -0
CAPN1-214ENST00000528165 PSAT1Q9Y617 370 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 SQORQ9Y6N5 450 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 SCN9AQ15858 1988 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 WDR81Q562E7 1941 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 SH3PXD2BA1X283 911 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 NEMP1O14524 444 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 PLOD1Q02809 727 aaPredicted RBP15.02■□□□□ -0
CAPN1-214ENST00000528165 TMEM62Q0P6H9 643 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 SMAD1Q15797 465 aaKnown RBP15.02■□□□□ -0
CAPN1-214ENST00000528165 NRF1Q16656 503 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 PPP6R3Q5H9R7 873 aaPredicted RBP15.02■□□□□ -0
CAPN1-214ENST00000528165 SLC9A4Q6AI14 798 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 XRRA1Q6P2D8 792 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 CHERPQ8IWX8 916 aaKnown RBP15.02■□□□□ -0
CAPN1-214ENST00000528165 PGAM4Q8N0Y7 254 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 FAM151AQ8WW52 585 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 CNDP1Q96KN2 507 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 XYLT2Q9H1B5 865 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 WDR41Q9HAD4 459 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 EPS15L1Q9UBC2 864 aa15.02■□□□□ -0
CAPN1-214ENST00000528165 ARHGEF37A1IGU5 675 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 C2CD4BA6NLJ0 364 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 GPR25O00155 361 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 BCAS2O75934 225 aaPredicted RBP15.02□□□□□ -0.01
CAPN1-214ENST00000528165 MICAL2O94851 1124 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 H6PDO95479 791 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 CAPNS1P04632 268 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 ARL2P36404 184 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 GMPRP36959 345 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 CD97P48960 835 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 NUMBP49757 651 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 SLC10A2Q12908 348 aaPredicted RBP15.02□□□□□ -0.01
CAPN1-214ENST00000528165 NAB1Q13506 487 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 ART3Q13508 389 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 BOLA3Q53S33 107 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 TMEM102Q8N9M5 508 aaPredicted RBP15.02□□□□□ -0.01
CAPN1-214ENST00000528165 SLC4A5Q9BY07 1137 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 WDR55Q9H6Y2 383 aaPredicted RBP15.02□□□□□ -0.01
CAPN1-214ENST00000528165 CAAP1Q9H8G2 361 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 PCDH18Q9HCL0 1135 aa15.02□□□□□ -0.01
CAPN1-214ENST00000528165 GRAP2O75791 330 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 TNNC2P02585 160 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 KRT19P08727 400 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 GARSP41250 739 aaKnown RBP15.01□□□□□ -0.01
CAPN1-214ENST00000528165 ALDH3B2P48448 385 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 CDH8P55286 799 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 NUP107P57740 925 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 PDAP1Q13442 181 aaKnown RBP15.01□□□□□ -0.01
CAPN1-214ENST00000528165 KRT80Q6KB66 452 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 ABHD15Q6UXT9 468 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 SETD3Q86TU7 594 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-214ENST00000528165 PPP1R36Q96LQ0 422 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 KLHL32Q96NJ5 620 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 VPS33BQ9H267 617 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 TMEM134Q9H6X4 195 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 NGRNQ9NPE2 291 aaKnown RBP15.01□□□□□ -0.01
CAPN1-214ENST00000528165 MYRFQ9Y2G1 1151 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 RNF11Q9Y3C5 154 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 TMEM114B3SHH9 223 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 F5H423 210 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-214ENST00000528165 PIK3R2O00459 728 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 RNASEH2AO75792 299 aaKnown RBP15.01□□□□□ -0.01
CAPN1-214ENST00000528165 ZNF26P17031 533 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-214ENST00000528165 EPHA3P29320 983 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 STT3AP46977 705 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 BAATQ14032 418 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-214ENST00000528165 C16orf72Q14CZ0 275 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 OR6B2Q6IFH4 312 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 TRNP1Q6NT89 227 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 NAPRTQ6XQN6 538 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 Q6ZNX1 250 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 DPH6Q7L8W6 267 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 RIN3Q8TB24 985 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 OSBPL6Q9BZF3 934 aa15.01□□□□□ -0.01
CAPN1-214ENST00000528165 KDM4FA0A1W2PPD8 638 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 KPNA7A9QM74 516 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 WDR46O15213 610 aaKnown RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 TCN1P20061 433 aaPredicted RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 TCF7P36402 384 aaPredicted RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 SESN2P58004 480 aaPredicted RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 TXNL4AP83876 142 aaKnown RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 PTPN11Q06124 597 aaPredicted RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 SEMA5AQ13591 1074 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 SURF1Q15526 300 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 MGAT5BQ3V5L5 792 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 DHRS4L2Q6PKH6 230 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 ZPBP2Q6X784 338 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 CMC1Q7Z7K0 106 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 ZNF512Q96ME7 567 aaPredicted RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 ILKAPQ9H0C8 392 aaPredicted RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 SNX15Q9NRS6 342 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 ZNHIT2Q9UHR6 403 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 TMEM221A6NGB7 291 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 BOLA2-SMG1P6H3BVE0 249 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 ASNSP08243 561 aa15□□□□□ -0.01
CAPN1-214ENST00000528165 PTPN1P18031 435 aaKnown RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 NELFEP18615 380 aaKnown RBP15□□□□□ -0.01
CAPN1-214ENST00000528165 PPARGP37231 505 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms