RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 C8orf33Q9H7E9 229 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-205ENST00000527046 ZWILCHQ9H900 591 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 ARHGEF3Q9NR81 526 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.12□□□□□ -0.63
NEDD8-205ENST00000527046 CWC15Q9P013 229 aaKnown RBP11.12□□□□□ -0.63
NEDD8-205ENST00000527046 PPARGC1AQ9UBK2 798 aaKnown RBP11.12□□□□□ -0.63
NEDD8-205ENST00000527046 SLC12A6Q9UHW9 1150 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 OR51B4Q9Y5P0 310 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 TTC28Q96AY4 2481 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 PI15O43692 258 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 SRGAP2O75044 1071 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 ADH1CP00326 375 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 CCDC175P0C221 793 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 CHRNB1P11230 501 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 TARSP26639 723 aaKnown RBP11.11□□□□□ -0.63
NEDD8-205ENST00000527046 CD70P32970 193 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 NOP2P46087 812 aaKnown RBP11.11□□□□□ -0.63
NEDD8-205ENST00000527046 PRKCQQ04759 706 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 KIF5AQ12840 1032 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 CCINQ13939 588 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 PON2Q15165 354 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 GEN1Q17RS7 908 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 SMTNL2Q2TAL5 461 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 ANO4Q32M45 955 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 EMC10Q5UCC4 262 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 CWF19L1Q69YN2 538 aaKnown RBP11.11□□□□□ -0.63
NEDD8-205ENST00000527046 C11orf63Q6NUN7 778 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 TPRG1Q6ZUI0 275 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 POLNQ7Z5Q5 900 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 KIAA1328Q86T90 577 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 NT5DC3Q86UY8 548 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 ADIPOR2Q86V24 386 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 CHSY1Q86X52 802 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 PSTKQ8IV42 348 aaKnown RBP11.11□□□□□ -0.63
NEDD8-205ENST00000527046 CCAR2Q8N163 923 aaKnown RBP11.11□□□□□ -0.63
NEDD8-205ENST00000527046 SIX5Q8N196 739 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.11□□□□□ -0.63
NEDD8-205ENST00000527046 DDI1Q8WTU0 396 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 ANP32BQ92688 251 aaKnown RBP11.11□□□□□ -0.63
NEDD8-205ENST00000527046 KRT35Q92764 455 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 PCDH18Q9HCL0 1135 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 DLGAP2Q9P1A6 1054 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 AP4E1Q9UPM8 1137 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 TBC1D30Q9Y2I9 924 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 SLC27A6Q9Y2P4 619 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 MFHAS1Q9Y4C4 1052 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
NEDD8-205ENST00000527046 NUP205Q92621 2012 aa11.11□□□□□ -0.63
NEDD8-205ENST00000527046 ATG2BQ96BY7 2078 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 KANSL1LA0AUZ9 987 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 MACROD2A1Z1Q3 448 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 WASH4PA8MWX3 477 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 F5H5T6 163 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 TNFRSF10AO00220 468 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 DDX3YO15523 660 aaKnown RBP11.1□□□□□ -0.63
NEDD8-205ENST00000527046 PRPSAP2O60256 369 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 PALMO75781 387 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 LUC7L3O95232 432 aaKnown RBP11.1□□□□□ -0.63
NEDD8-205ENST00000527046 EGFP01133 1207 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 GOT1P17174 413 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 MZF1P28698 734 aaPredicted RBP11.1□□□□□ -0.63
NEDD8-205ENST00000527046 EIF2DP41214 584 aaKnown RBP11.1□□□□□ -0.63
NEDD8-205ENST00000527046 SLC1A1P43005 524 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 HCAR3P49019 387 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 LMAN2Q12907 356 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 NR1H3Q13133 447 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 MMRN1Q13201 1228 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 MTA1Q13330 715 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 DPYSQ14117 519 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 GAS6Q14393 721 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 TAZQ16635 292 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 ARL13BQ3SXY8 428 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 LRRC38Q5VT99 294 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 CHST9Q7L1S5 443 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 TP53INP2Q8IXH6 220 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 APCDD1Q8J025 514 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 RNF10Q8N5U6 811 aaKnown RBP11.1□□□□□ -0.63
NEDD8-205ENST00000527046 HJURPQ8NCD3 748 aaPredicted RBP11.1□□□□□ -0.63
NEDD8-205ENST00000527046 FAM3CQ92520 227 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 CLDN23Q96B33 292 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 PNKPQ96T60 521 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 P2RY13Q9BPV8 354 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 NCAPGQ9BPX3 1015 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 DDX50Q9BQ39 737 aaKnown RBP11.1□□□□□ -0.63
NEDD8-205ENST00000527046 HERPUD2Q9BSE4 406 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 SLC2A11Q9BYW1 496 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 FOXQ1Q9C009 403 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 DHX35Q9H5Z1 703 aaKnown RBP11.1□□□□□ -0.63
NEDD8-205ENST00000527046 LTB4R2Q9NPC1 389 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 LUC7LQ9NQ29 371 aaKnown RBP11.1□□□□□ -0.63
NEDD8-205ENST00000527046 LZTFL1Q9NQ48 299 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 ETNK2Q9NVF9 386 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 STIM2Q9P246 746 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 GUCA1BQ9UMX6 200 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 TRIOO75962 3097 aa11.1□□□□□ -0.63
NEDD8-205ENST00000527046 MYO18AQ92614 2054 aaKnown RBP11.09□□□□□ -0.63
NEDD8-205ENST00000527046 KAT7O95251 611 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 IPO7O95373 1038 aaKnown RBP11.09□□□□□ -0.63
NEDD8-205ENST00000527046 ALADP13716 330 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 AMPD1P23109 780 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms