RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 FIBINQ8TAL6 211 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 UCMAQ8WVF2 138 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 DDX1Q92499 740 aaKnown RBP13□□□□□ -0.33
SMCO4-202ENST00000525141 TTC17Q96AE7 1141 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 NUP58Q9BVL2 599 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 ADAM33Q9BZ11 813 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
SMCO4-202ENST00000525141 MTG2Q9H4K7 406 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 CAPN10Q9HC96 672 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 STIM2Q9P246 746 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 GGA2Q9UJY4 613 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 GFPT2O94808 682 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 TRUB2O95900 331 aaKnown RBP12.99□□□□□ -0.33
SMCO4-202ENST00000525141 IGLV3-19P01714 112 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 EPHX1P07099 455 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 CCDC172P0C7W6 258 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 PABPC1P11940 636 aaKnown RBP12.99□□□□□ -0.33
SMCO4-202ENST00000525141 ENGP17813 658 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 SLC11A2P49281 568 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 TPMTP51580 245 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 LMAN2Q12907 356 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 PDCLQ13371 301 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 NNTQ13423 1086 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 PASD1Q8IV76 773 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 DEFB106AQ8N104 65 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 RNF214Q8ND24 703 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 FAM149B1Q96BN6 582 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 IQCDQ96DY2 449 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 TOE1Q96GM8 510 aaKnown RBP12.99□□□□□ -0.33
SMCO4-202ENST00000525141 PPP1R13BQ96KQ4 1090 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 MRGPRX3Q96LB0 322 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 CNTNAP3BQ96NU0 1288 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 SLC2A13Q96QE2 648 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 PRMT1Q99873 361 aaKnown RBP12.99□□□□□ -0.33
SMCO4-202ENST00000525141 CNTNAP3Q9BZ76 1288 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 POPDC2Q9HBU9 364 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 PRSS16Q9NQE7 514 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 IFNKQ9P0W0 207 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 SLC6A14Q9UN76 642 aa12.99□□□□□ -0.33
SMCO4-202ENST00000525141 IRAK2O43187 625 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 CBFA2T2O43439 604 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 ERBB2P04626 1255 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 SERPINF2P08697 491 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 DLDP09622 509 aaKnown RBP12.98□□□□□ -0.33
SMCO4-202ENST00000525141 CD6P30203 668 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 CDH5P33151 784 aaPredicted RBP12.98□□□□□ -0.33
SMCO4-202ENST00000525141 CTSOP43234 321 aaPredicted RBP12.98□□□□□ -0.33
SMCO4-202ENST00000525141 SNX16P57768 344 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 DUOXA1Q1HG43 343 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 ARTNQ5T4W7 220 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 NOP9Q86U38 636 aaKnown RBP12.98□□□□□ -0.33
SMCO4-202ENST00000525141 OR2I1PQ8NGU4 316 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 C1orf216Q8TAB5 229 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 EPS8L1Q8TE68 723 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 WFIKKN2Q8TEU8 576 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 DNASE2BQ8WZ79 361 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 BAP1Q92560 729 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 GOLGA1Q92805 767 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 SIPA1Q96FS4 1042 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 HSPA12BQ96MM6 686 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 SERPINB11Q96P15 392 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 NOX5Q96PH1 765 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 XPO4Q9C0E2 1151 aaKnown RBP12.98□□□□□ -0.33
SMCO4-202ENST00000525141 TTYH3Q9C0H2 523 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 TMEM9BQ9NQ34 198 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 PLA2G4CQ9UP65 541 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 ACACBO00763 2458 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 PCDH15Q96QU1 1955 aa12.98□□□□□ -0.33
SMCO4-202ENST00000525141 CACNA1EQ15878 2313 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 A0A1W2PQJ5 194 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 METTL12A8MUP2 240 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 ZBTB24O43167 697 aaPredicted RBP12.97□□□□□ -0.33
SMCO4-202ENST00000525141 SART1O43290 800 aaKnown RBP12.97□□□□□ -0.33
SMCO4-202ENST00000525141 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
SMCO4-202ENST00000525141 SYNCRIPO60506 623 aaKnown RBP12.97□□□□□ -0.33
SMCO4-202ENST00000525141 GRAP2O75791 330 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 LSM8O95777 96 aaKnown RBP12.97□□□□□ -0.33
SMCO4-202ENST00000525141 FERP16591 822 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 TACR2P21452 398 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 PMLP29590 882 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 RPS14P62263 151 aaKnown RBP12.97□□□□□ -0.33
SMCO4-202ENST00000525141 CDR2Q01850 454 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 STARD3Q14849 445 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 PTPN20Q4JDL3 420 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 RAP1GAP2Q684P5 730 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 OLFML1Q6UWY5 402 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 SERPINA13PQ6UXR4 307 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 FAM183BPQ6ZVS7 135 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 IRF2BP2Q7Z5L9 587 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 APCDD1Q8J025 514 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 LGI2Q8N0V4 545 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 AHI1Q8N157 1196 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 TMEM35BQ8NCS4 154 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 OR2T3Q8NH03 318 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 PRCCQ92733 491 aaPredicted RBP12.97□□□□□ -0.33
SMCO4-202ENST00000525141 GPR174Q9BXC1 333 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 PDCL3Q9H2J4 239 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 ANLNQ9NQW6 1124 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 ASNSD1Q9NWL6 643 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms