RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 PIGHQ14442 188 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ARID5BQ14865 1188 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ACAP1Q15027 740 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 SPA17Q15506 151 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CRY1Q16526 586 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 SLC18A3Q16572 532 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 GEN1Q17RS7 908 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 C15orf59Q2T9L4 293 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCDC14Q49A88 953 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 C6orf118Q5T5N4 469 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 OTUD1Q5VV17 481 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 EGFLAMQ63HQ2 1017 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 HGSNATQ68CP4 663 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 MBLAC2Q68D91 279 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 HEATR6Q6AI08 1181 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 PLEKHA7Q6IQ23 1121 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ANO7Q6IWH7 933 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 RWDD4Q6NW29 188 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 FBXL22Q6P050 247 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 WDR59Q6PJI9 974 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 TSSK4Q6SA08 328 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 H2AFVQ71UI9 128 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CEP68Q76N32 757 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 SLFN11Q7Z7L1 901 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 C11orf74Q86VG3 221 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 LONP2Q86WA8 852 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCAR2Q8N163 923 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 TXLNBQ8N3L3 684 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 PHTF2Q8N3S3 785 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 IL17RCQ8NAC3 791 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 TXNDC5Q8NBS9 432 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 FNIP1Q8TF40 1166 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ANP32BQ92688 251 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 NTAN1Q96AB6 310 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 C1orf74Q96LT6 269 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 HHIPQ96QV1 700 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 EIF3CQ99613 913 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 EPAS1Q99814 870 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 PRMT1Q99873 361 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZYG11BQ9C0D3 744 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 MUC3BQ9H195 1237 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ISCUQ9H1K1 167 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 RETREG1Q9H6L5 497 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 NHEJ1Q9H9Q4 299 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 FBRSQ9HAH7 460 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ELOVL2Q9NXB9 296 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CTTNBP2NLQ9P2B4 639 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ARHGAP20Q9P2F6 1191 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 UVRAGQ9P2Y5 699 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 IP6K2Q9UHH9 426 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 XPO7Q9UIA9 1087 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 SLC25A13Q9UJS0 675 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ANAPC7Q9UJX3 599 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 VPS28Q9UK41 221 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 FBXO10Q9UK96 956 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 STARD13Q9Y3M8 1113 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 HS3ST4Q9Y661 456 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMEM191CA6NGB0 347 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 PRRT4C9JH25 899 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 SGK1O00141 431 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 MYO1FO00160 1098 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 TRIM24O15164 1050 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 AXIN1O15169 862 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 DAPK3O43293 454 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 RNASEH1O60930 286 aaKnown RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ENDOD1O94919 500 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CYP1A2P05177 515 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 SRPRAP08240 638 aaKnown RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMEM253P0C7T8 217 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 HNRNPLP14866 589 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 EPHB2P29323 1055 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CDC25BP30305 580 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 OR1E1P30953 314 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CD70P32970 193 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 HTR7P34969 479 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ADRA1BP35368 520 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 GGCXP38435 758 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CSKP41240 450 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 WASP42768 502 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 FNTBP49356 437 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF135P52742 658 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ATXN1P54253 815 aaKnown RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 GALCP54803 685 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 HDAC4P56524 1084 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 GEMIN4P57678 1058 aaKnown RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 TPI1P60174 286 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 RPL7AP62424 266 aaKnown RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 NRG1Q02297 640 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 NHLH1Q02575 133 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 GFPT1Q06210 699 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 MESP2Q0VG99 397 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 SCAPQ12770 1279 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 SFSWAPQ12872 951 aaKnown RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 LMAN2Q12907 356 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 TBX2Q13207 712 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 GAS6Q14393 721 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF234Q14588 700 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ELF2Q15723 593 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 HADHQ16836 314 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms