RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 FIBINQ8TAL6 211 aa12.25□□□□□ -0.45
CLNS1A-202ENST00000525064 AZIN2Q96A70 460 aa12.25□□□□□ -0.45
CLNS1A-202ENST00000525064 TTC17Q96AE7 1141 aa12.25□□□□□ -0.45
CLNS1A-202ENST00000525064 SIX2Q9NPC8 291 aa12.25□□□□□ -0.45
CLNS1A-202ENST00000525064 RWDD2AQ9UIY3 292 aa12.25□□□□□ -0.45
CLNS1A-202ENST00000525064 PLA2G4CQ9UP65 541 aa12.25□□□□□ -0.45
CLNS1A-202ENST00000525064 NFE2L3Q9Y4A8 694 aa12.25□□□□□ -0.45
CLNS1A-202ENST00000525064 DOCK4Q8N1I0 1966 aa12.25□□□□□ -0.45
CLNS1A-202ENST00000525064 A0A1B0GVT2 93 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 BCAT2O15382 392 aaPredicted RBP12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 SIN3BO75182 1162 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 LUC7L3O95232 432 aaKnown RBP12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 TACR2P21452 398 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 EIF4EBP2Q13542 120 aaPredicted RBP12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 E2F5Q15329 346 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 PITRM1Q5JRX3 1037 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 TMEM110Q86TL2 294 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 CHSY1Q86X52 802 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 NAXDQ8IW45 347 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 DHX40Q8IX18 779 aaKnown RBP12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 APCDD1Q8J025 514 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 LGI2Q8N0V4 545 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 CHCHD4Q8N4Q1 142 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 CPXM1Q96SM3 734 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 SERGEFQ9UGK8 458 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 RALYQ9UKM9 306 aaKnown RBP12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 ZMIZ1Q9ULJ6 1067 aa12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 FNDC3AQ9Y2H6 1198 aaKnown RBP12.24□□□□□ -0.45
CLNS1A-202ENST00000525064 DMXL2Q8TDJ6 3036 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 SYNJ2BP-COX16A0A087WUM0 186 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 TTC34A8MYJ7 566 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 CAPN9O14815 690 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 SART1O43290 800 aaKnown RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 MED7O43513 233 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 GRAP2O75791 330 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 SEMA4FO95754 770 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 TRUB2O95900 331 aaKnown RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 ATP5BP06576 529 aaKnown RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 PON1P27169 355 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 USP8P40818 1118 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 CSNK1EP49674 416 aaKnown RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 STK19P49842 368 aaPredicted RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 IRAK1P51617 712 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 UBE2HP62256 183 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 CDH18Q13634 790 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 MEA1Q16626 185 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 ZNF776Q68DI1 518 aaPredicted RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 BEND5Q7L4P6 421 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 DEFB106AQ8N104 65 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 C1orf131Q8NDD1 294 aaKnown RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 STK32AQ8WU08 396 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 SHC3Q92529 594 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 BIRC7Q96CA5 298 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 PRMT1Q99873 361 aaKnown RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 DDX50Q9BQ39 737 aaKnown RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 ORAI3Q9BRQ5 295 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 IRX2Q9BZI1 471 aaPredicted RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 RSPH9Q9H1X1 276 aaPredicted RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 GAREM1Q9H706 876 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 POPDC2Q9HBU9 364 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 COX16Q9P0S2 106 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 APEX2Q9UBZ4 518 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 ERVW-1Q9UQF0 538 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 FREM2Q5SZK8 3169 aa12.23□□□□□ -0.45
CLNS1A-202ENST00000525064 ITIH6Q6UXX5 1313 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 FAM170AA1A519 330 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 TYW5A2RUC4 315 aaKnown RBP12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 MID1O15344 667 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 CBFA2T3O75081 653 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 FSBPO95073 299 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 FGFR1OPO95684 399 aaKnown RBP12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 APOEP02649 317 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 DNTTP04053 509 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 ERBB2P04626 1255 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 GGCXP38435 758 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 MATKP42679 507 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 CENPCQ03188 943 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 SLC14A1Q13336 389 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 TRIP6Q15654 476 aaKnown RBP12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 EXOC3L4Q17RC7 722 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 HLA-BQ31612 363 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 HNRNPA1L2Q32P51 320 aaKnown RBP12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 KCNT1Q5JUK3 1230 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 C9orf64Q5T6V5 341 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 OTUD1Q5VV17 481 aaPredicted RBP12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 DPY19L2P1Q6NXN4 242 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 FAM183BPQ6ZVS7 135 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 ENOSF1Q7L5Y1 443 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 RAB44Q7Z6P3 723 aaPredicted RBP12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 PNPLA1Q8N8W4 532 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 RPL10LQ96L21 214 aaKnown RBP12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 SLC2A13Q96QE2 648 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 ZDHHC5Q9C0B5 715 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 BTBD1Q9H0C5 482 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 PCED1AQ9H1Q7 454 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 PABPC3Q9H361 631 aaKnown RBP12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 THAP9Q9H5L6 903 aa12.22□□□□□ -0.45
CLNS1A-202ENST00000525064 FBRSQ9HAH7 460 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms