RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	RIC8A	Q9NPQ8	531 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	NECTIN3	Q9NQS3	549 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	IGSF9	Q9P2J2	1179 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	NDRG4	Q9ULP0	352 aa	Known RBP	5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	MED16	Q9Y2X0	877 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	TMX2	Q9Y320	296 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	LRRC37A3	O60309	1634 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	ADAMTS7	Q9UKP4	1686 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	RGPD8	O14715	1765 aa	Predicted RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	FAM234B	A2RU67	622 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	QSOX1	O00391	747 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	PODXL	O00592	558 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	SLC16A3	O15427	465 aa	Known RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	FAM155B	O75949	473 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	LATS1	O95835	1130 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	DPEP1	P16444	411 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	XBP1	P17861	261 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	LIFR	P42702	1097 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	TUB	P50607	506 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	ATXN1	P54253	815 aa	Known RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	EEFSEC	P57772	596 aa	Known RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	TLE2	Q04725	743 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	KLF9	Q13886	244 aa	Predicted RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	RAB30	Q15771	203 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	LY6K	Q17RY6	165 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	CCDC184	Q52MB2	194 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	PRAMEF17	Q5VTA0	474 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	SUMO4	Q6EEV6	95 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	ZNF425	Q6IV72	752 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	CEP85	Q6P2H3	762 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	DSTYK	Q6XUX3	929 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	SLC29A4	Q7RTT9	530 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	YTHDF3	Q7Z739	585 aa	Known RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	MICU3	Q86XE3	530 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	CPO	Q8IVL8	374 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	OR8H2	Q8N162	312 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	LRRC71	Q8N4P6	559 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	ADAMTS18	Q8TE60	1221 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	STYX	Q8WUJ0	223 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	XAGE5	Q8WWM1	108 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	CENPI	Q92674	756 aa	Predicted RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	PYM1	Q9BRP8	204 aa	Known RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	PTDSS2	Q9BVG9	487 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	C1QTNF7	Q9BXJ2	289 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	DUSP22	Q9NRW4	184 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	XPR1	Q9UBH6	696 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	ITGB1BP2	Q9UKP3	347 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	ABT1	Q9ULW3	272 aa	Known RBP	5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	TBC1D30	Q9Y2I9	924 aa		5.25	□□□□□ -1.57
SREK1-213	ENST00000523655	IQGAP3	Q86VI3	1631 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655		A1L4Q6	167 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655		F5H0A9	414 aa	Predicted RBP	5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	BTN3A1	O00481	513 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	GFPT2	O94808	682 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	NXPH3	O95157	252 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	TBX18	O95935	607 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	ATXN1L	P0C7T5	689 aa	Known RBP	5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	MYL4	P12829	197 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	LOXL3	P58215	753 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	SLC10A2	Q12908	348 aa	Predicted RBP	5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	ETFDH	Q16134	617 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	TIGD6	Q17RP2	521 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	WDR45B	Q5MNZ6	344 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	DEPDC1	Q5TB30	811 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	FBXO38	Q6PIJ6	1188 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	SLC2A7	Q6PXP3	512 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	ZNF783	Q6ZMS7	281 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	DPY19L3	Q6ZPD9	716 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	NEK10	Q6ZWH5	1172 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	RNF44	Q7L0R7	432 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	FASTKD5	Q7L8L6	764 aa	Known RBP	5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	HEATR4	Q86WZ0	1026 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	HERC6	Q8IVU3	1022 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	FTSJ3	Q8IY81	847 aa	Known RBP	5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	SDR16C5	Q8N3Y7	309 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	IPO4	Q8TEX9	1081 aa	Known RBP	5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	FAM122A	Q96E09	287 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	MAEL	Q96JY0	434 aa	Known RBP	5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	CAPNS2	Q96L46	248 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	NELL2	Q99435	816 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	KATNAL1	Q9BW62	490 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	CXorf36	Q9H7Y0	433 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	JMJD4	Q9H9V9	463 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	PLEKHA5	Q9HAU0	1116 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	FLRT1	Q9NZU1	646 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	KIF17	Q9P2E2	1029 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	SRP68	Q9UHB9	627 aa	Known RBP	5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	TTLL3	Q9Y4R7	772 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	PAXBP1	Q9Y5B6	917 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	TUBGCP6	Q96RT7	1819 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	ALS2	Q96Q42	1657 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	CACNA1A	O00555	2505 aa		5.24	□□□□□ -1.57
SREK1-213	ENST00000523655	PKD1L3	Q7Z443	1732 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	TRPM3	Q9HCF6	1732 aa	Predicted RBP	5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	ANKRD18B	A2A2Z9	1011 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	TMEM233	B4DJY2	109 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	CA12	O43570	354 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	TBC1D4	O60343	1298 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	TMCC2	O75069	709 aa		5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms