RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SLC47A2Q86VL8 602 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 FAM71AQ8IYT1 594 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 LGI2Q8N0V4 545 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 DEFB106AQ8N104 65 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 KDM1BQ8NB78 822 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 TMEM35BQ8NCS4 154 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 C1orf131Q8NDD1 294 aaKnown RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 ENOX1Q8TC92 643 aaKnown RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 WFDC5Q8TCV5 224 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 CYB5D2Q8WUJ1 264 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 RNF34Q969K3 372 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 TTC17Q96AE7 1141 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 PRICKLE1Q96MT3 831 aaPredicted RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 SLC2A13Q96QE2 648 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 GPR174Q9BXC1 333 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 NAT10Q9H0A0 1025 aaKnown RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 GRPEL1Q9HAV7 217 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 CD93Q9NPY3 652 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 SAMSN1Q9NSI8 373 aaKnown RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 ANO10Q9NW15 660 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 TMEM51Q9NW97 253 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 DDIT4Q9NX09 232 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 RRN3Q9NYV6 651 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 KIAA1522Q9P206 1035 aaPredicted RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 AJAP1Q9UKB5 411 aaPredicted RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 SYNJ2BP-COX16A0A087WUM0 186 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 F5H5T6 163 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 DAB1O75553 588 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 DNTTP04053 509 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 C7P10643 843 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 CEACAM1P13688 526 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 CYP11B1P15538 503 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 CSRP1P21291 193 aaKnown RBP11.27□□□□□ -0.61
PVT1-216ENST00000523068 TACR2P21452 398 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 NOS2P35228 1153 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 MAPK8P45983 427 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 NOVA1P51513 510 aaKnown RBP11.27□□□□□ -0.61
PVT1-216ENST00000523068 OXCT1P55809 520 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 SLC6A3Q01959 620 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 KCNMA1Q12791 1236 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 SFSWAPQ12872 951 aaKnown RBP11.27□□□□□ -0.61
PVT1-216ENST00000523068 EIF4EBP2Q13542 120 aaPredicted RBP11.27□□□□□ -0.61
PVT1-216ENST00000523068 SLC12A1Q13621 1099 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 DRAP1Q14919 205 aaPredicted RBP11.27□□□□□ -0.61
PVT1-216ENST00000523068 UAP1L1Q3KQV9 507 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 TTC31Q49AM3 519 aaPredicted RBP11.27□□□□□ -0.61
PVT1-216ENST00000523068 RABGAP1LQ5R372 815 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 RAP1GAP2Q684P5 730 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 PSAPL1Q6NUJ1 521 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 SLC26A9Q7LBE3 791 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 CFAP52Q8N1V2 620 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 HDDC3Q8N4P3 179 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 MSANTD4Q8NCY6 345 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 ZNF397Q8NF99 534 aaPredicted RBP11.27□□□□□ -0.61
PVT1-216ENST00000523068 LMLNQ96KR4 655 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 PPP1R9BQ96SB3 815 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 PCED1AQ9H1Q7 454 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 CAPN10Q9HC96 672 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 PLCB1Q9NQ66 1216 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 COX16Q9P0S2 106 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 SCML1Q9UN30 329 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 GON4LQ3T8J9 2241 aa11.27□□□□□ -0.61
PVT1-216ENST00000523068 A0A1B0GTW7 788 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 ARHGAP33O14559 1287 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 RNASEH1O60930 286 aaKnown RBP11.26□□□□□ -0.61
PVT1-216ENST00000523068 GRAP2O75791 330 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 ERBB2P04626 1255 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 SRPRAP08240 638 aaKnown RBP11.26□□□□□ -0.61
PVT1-216ENST00000523068 PNMA6AP0CW24 399 aaPredicted RBP11.26□□□□□ -0.61
PVT1-216ENST00000523068 UCHL3P15374 230 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 NNMTP40261 264 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 CSKP41240 450 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 PITX1P78337 314 aaPredicted RBP11.26□□□□□ -0.61
PVT1-216ENST00000523068 PLEKHG6Q3KR16 790 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 PTPN20Q4JDL3 420 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 PITRM1Q5JRX3 1037 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 N4BP2L1Q5TBK1 243 aaPredicted RBP11.26□□□□□ -0.61
PVT1-216ENST00000523068 SH3PXD2AQ5TCZ1 1133 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 RNF219Q5W0B1 726 aaPredicted RBP11.26□□□□□ -0.61
PVT1-216ENST00000523068 ZNF776Q68DI1 518 aaPredicted RBP11.26□□□□□ -0.61
PVT1-216ENST00000523068 DPY19L2P1Q6NXN4 242 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 OLFML1Q6UWY5 402 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 SND1Q7KZF4 910 aaKnown RBP eCLIP11.26□□□□□ -0.61
PVT1-216ENST00000523068 GAS2L3Q86XJ1 694 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 CACUL1Q86Y37 369 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 ZNF366Q8N895 744 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 ANKRD20A12PQ8NF67 263 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 DNASE2BQ8WZ79 361 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 FUCA2Q9BTY2 467 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 GTPBP2Q9BX10 602 aaKnown RBP11.26□□□□□ -0.61
PVT1-216ENST00000523068 STK33Q9BYT3 514 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 ZDHHC5Q9C0B5 715 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 SLC32A1Q9H598 525 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 PRSS16Q9NQE7 514 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 XPO7Q9UIA9 1087 aaKnown RBP11.26□□□□□ -0.61
PVT1-216ENST00000523068 STAP1Q9ULZ2 295 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 DAAM1Q9Y4D1 1078 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 PAXBP1Q9Y5B6 917 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 FHOD1Q9Y613 1164 aa11.26□□□□□ -0.61
PVT1-216ENST00000523068 A0A1B0GVM2 712 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms