RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	TMA16	Q96EY4	203 aa	Known RBP	10.92	□□□□□ -0.66
CLDND1-231	ENST00000515620	NT5C1A	Q9BXI3	368 aa		10.92	□□□□□ -0.66
CLDND1-231	ENST00000515620	SATB2	Q9UPW6	733 aa		10.92	□□□□□ -0.66
CLDND1-231	ENST00000515620	SRPRB	Q9Y5M8	271 aa	Known RBP	10.92	□□□□□ -0.66
CLDND1-231	ENST00000515620	COL12A1	Q99715	3063 aa		10.92	□□□□□ -0.66
CLDND1-231	ENST00000515620	TEX15	Q9BXT5	2789 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	UBE4B	O95155	1302 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	DOPEY2	Q9Y3R5	2298 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3D	A0A087WVF3	549 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3I	A0A087WXS9	549 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3E	A0A087X179	549 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3K	A0A087X1G2	549 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3L	B9A6J9	549 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	LAT	O43561	262 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	EIF5B	O60841	1220 aa	Known RBP	10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3H	P0C7X1	549 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	MYF5	P13349	255 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	GOT1	P17174	413 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	RBMS1	P29558	406 aa	Known RBP	10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	MAT2A	P31153	395 aa	Known RBP	10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	PIK3CA	P42336	1068 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	ZNF445	P59923	1031 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	ASIC1	P78348	528 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	INCA1	Q0VD86	236 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	SGSM1	Q2NKQ1	1148 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	ZSCAN23	Q3MJ62	389 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	ADGRF1	Q5T601	910 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	C9orf64	Q5T6V5	341 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3G	Q6DHY5	549 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3C	Q6IPX1	549 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	ATG14	Q6ZNE5	492 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	PARD3B	Q8TEW8	1205 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	SPOCK2	Q92563	424 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	DUSP16	Q9BY84	665 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	OSBPL2	Q9H1P3	480 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	WDR70	Q9NW82	654 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	UCKL1	Q9NWZ5	548 aa		10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620	TPX2	Q9ULW0	747 aa	Known RBP	10.91	□□□□□ -0.66
CLDND1-231	ENST00000515620		A0A1W2PNU3	283 aa	Predicted RBP	10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	TTC34	A8MYJ7	566 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	MSI1	O43347	362 aa	Known RBP	10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	MAGEC1	O60732	1142 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	TBL1X	O60907	577 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	ASS1	P00966	412 aa	Known RBP	10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	CKMT1A	P12532	417 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	CD58	P19256	250 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	DGKA	P23743	735 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	CSK	P41240	450 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	SNRPF	P62306	86 aa	Known RBP	10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	DLG4	P78352	724 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	CLDN10	P78369	228 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	CEBPZ	Q03701	1054 aa	Known RBP	10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	POM121L1P	Q3SYA9	428 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	SGO2	Q562F6	1265 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	RFWD3	Q6PCD5	774 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	IQCH	Q86VS3	1027 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	MFN1	Q8IWA4	741 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	TAF4B	Q92750	862 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	TTC17	Q96AE7	1141 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	CCDC97	Q96F63	343 aa	Predicted RBP	10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	MRGPRX3	Q96LB0	322 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	ABCG4	Q9H172	646 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	STIM2	Q9P246	746 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	ANKMY1	Q9P2S6	941 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	TFIP11	Q9UBB9	837 aa	Known RBP	10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	CYTH4	Q9UIA0	394 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	STOML2	Q9UJZ1	356 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	SMC3	Q9UQE7	1217 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	CA5B	Q9Y2D0	317 aa		10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	HBS1L	Q9Y450	684 aa	Known RBP	10.9	□□□□□ -0.66
CLDND1-231	ENST00000515620	EDDM13	A0A1B0GTR0	161 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	PMS2P1	A4D2B8	440 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	LATS1	O95835	1130 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	ADH1B	P00325	375 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	IL1B	P01584	269 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	HLA-DRA	P01903	254 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	ASL	P04424	464 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	RPN1	P04843	607 aa	Known RBP	10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	SLFN14	P0C7P3	912 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	C5AR1	P21730	350 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	SKOR1	P84550	965 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	OVGP1	Q12889	678 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	CLN3	Q13286	438 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	STAT4	Q14765	748 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	ISX	Q2M1V0	245 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	ZACN	Q401N2	412 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	FOXR1	Q6PIV2	292 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	IGF2-AS	Q6U949	168 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	PRPF39	Q86UA1	669 aa	Known RBP	10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	PIGZ	Q86VD9	579 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	C12orf56	Q8IXR9	622 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	STK40	Q8N2I9	435 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	MAPK15	Q8TD08	544 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	NDRG1	Q92597	394 aa	Known RBP	10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	EDEM1	Q92611	657 aa		10.89	□□□□□ -0.67

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