RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 WDR70Q9NW82 654 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 UXTQ9UBK9 157 aaPredicted RBP13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 ADAMTS5Q9UNA0 930 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 CDYLQ9Y232 598 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 HEATR9A2RTY3 570 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 VPS26AO75436 327 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 SOAT2O75908 522 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 ANP32DO95626 131 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 ENO3P13929 434 aaPredicted RBP13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 OR52K1Q8NGK4 314 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 LRRN4Q8WUT4 740 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 FAM136AQ96C01 138 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 NFKBIZQ9BYH8 718 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 OR6C75A6NL08 312 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 PTPN7P35236 360 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 GPD2P43304 727 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 IL1RL1Q01638 556 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 HECTD3Q5T447 861 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 LDLRAD1Q5T700 205 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 GRTP1Q5TC63 336 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 PDPK2PQ6A1A2 396 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 KRT80Q6KB66 452 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 TTC27Q6P3X3 843 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 MFN1Q8IWA4 741 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 ATXN2LQ8WWM7 1075 aaKnown RBP13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 APOPT1Q96IL0 206 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 CSPG4P5Q96PW8 444 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 FIZ1Q96SL8 496 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 MRPL1Q9BYD6 325 aaKnown RBP13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 IL22Q9GZX6 179 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 DDX20Q9UHI6 824 aaKnown RBP13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 AIM2O14862 343 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 ANGPT2O15123 496 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 MMP13P45452 471 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 CPA2P48052 419 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 PEX5P50542 639 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 CRADDP78560 199 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 LBRQ14739 615 aaKnown RBP13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 TTLL9Q3SXZ7 439 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 N4BP2L1Q5TBK1 243 aaPredicted RBP13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 RAP1GAP2Q684P5 730 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 OLFML2BQ68BL8 750 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 UGT3A1Q6NUS8 523 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 ANGPTL8Q6UXH0 198 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 RGS9BPQ6ZS82 235 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 PLD5Q8N7P1 536 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 KCNV2Q8TDN2 545 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 SH3KBP1Q96B97 665 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 SHCBP1LQ9BZQ2 653 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 GLI3P10071 1580 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 TAF1P21675 1872 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 A0A096LPK6 155 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 ARL5CA6NH57 179 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 TTLL13PA6NNM8 815 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 RBP1P09455 135 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 CCNB1P14635 433 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 SELPP16109 830 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 LMO2P25791 158 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 ZNF470Q6ECI4 717 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 TTC30AQ86WT1 665 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 SPPL2BQ8TCT7 592 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 NDRG1Q92597 394 aaKnown RBP13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 FCRL2Q96LA5 508 aaPredicted RBP13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 FOPNLQ96NB1 174 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 SYTL2Q9HCH5 934 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 NCKIPSDQ9NZQ3 722 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 SEPT3Q9UH03 358 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 DNAJC16Q9Y2G8 782 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 Q9Y3F1 56 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 ACTL7BQ9Y614 415 aa13.4□□□□□ -0.26
PCDHA4-202ENST00000512229 C2CD4BA6NLJ0 364 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 VGLL3A8MV65 326 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 GOLGA8TH3BQL2 631 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 PAPSS1O43252 624 aaPredicted RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 F2P00734 622 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 ADRA1DP25100 572 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 PTPN9P43378 593 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 AIF1P55008 147 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 GBE1Q04446 702 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CSHL1Q14406 222 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 TAF5Q15542 800 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 VSTM1Q6UX27 236 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 LRRC49Q8IUZ0 686 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 P2RY11Q96G91 374 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 KCNK16Q96T55 309 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CPNE1Q99829 537 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 ACSS3Q9H6R3 686 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CYLDQ9NQC7 956 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 DPP7Q9UHL4 492 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 SCOCQ9UIL1 159 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 MYBPHLA2RUH7 354 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CARNS1A5YM72 827 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 PIAS1O75925 651 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CSH1P0DML2 217 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CSH2P0DML3 217 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 TSHRP16473 764 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms